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Effects of sunlight on anthocyanin accumulation and associated co-expression gene networks in developing grape berries
Zou, Luming1; Zhong, Gan-Yuan; Wu, Benhong; Yang, Yingzhen2; Li, Shaohua; Liang, Zhenchang3
2019
发表期刊ENVIRONMENTAL AND EXPERIMENTAL BOTANY
ISSN0098-8472
卷号166
摘要Three Vitis species were used to investigate the effects of sunlight exposure on anthocyanin accumulation in five developmental stages. The berries of these three grapes were treated with exclusion of sunlight or recovery of sunlight during different developmental stages. Vitis labrusca cannot accumulate anthocyanins in its berries under dark conditions. V. acerifolia and V. cinerea can accumulate anthocyanins under dark conditions. Using high-throughput RNA sequencing, we produced transcriptomes for these samples. Then, we constructed a weighted gene co-expression network of these three Vitis species and defined 17 modules which were correlated to anthocyanin concentrations, developmental stages and species. Analysis of the anthocyanin correlated co-expression network module revealed that two novel bHLH genes might be involved in anthocyanin regulation in grapes. Moreover, the hormone transductions might enhance anthocyanin accumulation in V. acerifolia and V. cinerea under dark. Further functional analysis of anthocyanin negatively correlated modules revealed that anthocyanin accumulation might be inhibited by COP1-dependent protein degradation before veraison and under dark conditions in grape berries.
关键词Grape berries Transcriptome Co-expression network Sunlight Wild grape Anthocyanin accumulation
学科领域Plant Sciences ; Environmental Sciences
DOI10.1016/j.envexpbot.2019.103811
收录类别SCI
语种英语
WOS关键词NAC TRANSCRIPTION FACTORS ; LOW-TEMPERATURE ; BIOSYNTHESIS ; EXPRESSION ; SKIN ; PROTEIN ; LIGHT ; FRUIT ; ARABIDOPSIS ; PATHWAY
WOS研究方向Plant Sciences ; Environmental Sciences & Ecology
WOS记录号WOS:000482246100009
出版者PERGAMON-ELSEVIER SCIENCE LTD
文献子类Article
出版地OXFORD
EISSN1873-7307
资助机构National Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [31772266, 31572090] ; Agricultural Breeding Project of Ningxia Hui Autonomous Region [NXNYYZ20150203] ; Hundred Talents of Chinese Academy of Sciences ; Beijing Key Laboratory of New Technique in Agricultural Application [5076516003/5]
作者邮箱lumingzou@hotmail.com ; GanYuan.Zhong@ARS.USDA.GaOV ; bhwu@ibcas.ac.cn ; yingzhen.yang@ars.usda.gov ; shhli@ibcas.ac.cn ; zl249@ibcas.ac.cn
作品OA属性Bronze
引用统计
被引频次:15[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.ibcas.ac.cn/handle/2S10CLM1/19644
专题中科院北方资源植物重点实验室
作者单位1.Chinese Acad Sci, Inst Bot, CAS Key Lab Plant Resources, Beijing Key Lab Grape Sci & Enol, Beijing 100093, Peoples R China
2.Univ Chinese Acad Sci, Beijing, Peoples R China
3.USDA ARS, Grape Genet Res Unit, Geneva, NY 14456 USA
4.Chinese Acad Sci, Sino Africa Joint Res Ctr, Wuhan 430074, Hubei, Peoples R China
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GB/T 7714
Zou, Luming,Zhong, Gan-Yuan,Wu, Benhong,et al. Effects of sunlight on anthocyanin accumulation and associated co-expression gene networks in developing grape berries[J]. ENVIRONMENTAL AND EXPERIMENTAL BOTANY,2019,166.
APA Zou, Luming,Zhong, Gan-Yuan,Wu, Benhong,Yang, Yingzhen,Li, Shaohua,&Liang, Zhenchang.(2019).Effects of sunlight on anthocyanin accumulation and associated co-expression gene networks in developing grape berries.ENVIRONMENTAL AND EXPERIMENTAL BOTANY,166.
MLA Zou, Luming,et al."Effects of sunlight on anthocyanin accumulation and associated co-expression gene networks in developing grape berries".ENVIRONMENTAL AND EXPERIMENTAL BOTANY 166(2019).
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