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| The Gastrodia elata genome provides insights into plant adaptation to heterotrophy | |
Yuan, Yuan; Jin, Xiaohua1 ; Liu, Juan; Zhao, Xing2; Zhou, Junhui; Wang, Xin; Wang, Deyi1; Lai, Changjiangsheng; Xu, Wei2; Huang, Jingwen; Zha, Liangping3; Liu, Dahui4; Ma, Xiao1; Wang, Li5; Zhou, Menyan2; Jiang, Zhi2; Meng, Hubiao; Peng, Huasheng3; Liang, Yuting; Li, Ruiqiang2; Jiang, Chao; Zhao, Yuyang; Nan, Tiegui; Jin, Yan; Zhan, Zhilai; Yang, Jian; Jiang, Wenkai2; Huang, Luqi
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| 2018 | |
| Source Publication | NATURE COMMUNICATIONS
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| ISSN | 2041-1723 |
| Volume | 9 |
| Abstract | We present the 1.06 Gb sequenced genome of Gastrodia elata, an obligate mycoheterotrophic plant, which contains 18,969 protein-coding genes. Many genes conserved in other plant species have been deleted from the G. elata genome, including most of those for photosynthesis. Additional evidence of the influence of genome plasticity in the adaptation of this mycoheterotrophic lifestyle is evident in the large number of gene families that are expanded in G. elata, including glycoside hydrolases and urease that likely facilitate the digestion of hyphae are expanded, as are genes associated with strigolactone signaling, and ATPases that may contribute to the atypical energy metabolism. We also find that the plastid genome of G. elata is markedly smaller than that of green plant species while its mitochondrial genome is one of the largest observed to date. Our report establishes a foundation for studying adaptation to a mycoheterotrophic lifestyle. |
| Subject Area | Multidisciplinary Sciences |
| DOI | 10.1038/s41467-018-03423-5 |
| Indexed By | SCI |
| Language | 英语 |
| WOS Keyword | SEQUENCE ; IDENTIFICATION ; PROTEIN ; EVOLUTION ; GENES ; ANNOTATION ; DATABASE ; REVEALS ; ORIGIN ; FULL |
| WOS ID | WOS:000430674000004 |
| Publisher | NATURE RESEARCH |
| Subtype | Article |
| Publication Place | BERLIN |
| Funding Organization | Fundamental Research Funds for the Central public welfare research institutes [ZZ10-008] ; Key project at central government level for the ability establishment of sustainable use for valuable Chinese medicine resources [2060302] |
| Corresponding Author Email | y_yuan0732@163.com ; jiangwenkai@novogene.com ; huangluqi01@126.com |
| OA | gold, Green Published |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://ir.ibcas.ac.cn/handle/2S10CLM1/20327 |
| Collection | 系统与进化植物学国家重点实验室 |
| Affiliation | 1.Chinese Acad Chinese Med Sci, Natl Resource Ctr Chinese Meteria Med, Beijing 100700, Peoples R China 2.Chinese Acad Sci IBCAS, Inst Bot, Beijing 100093, Peoples R China 3.Novogene Bioinformat Inst, Beijing 100083, Peoples R China 4.Anhui Univ Chinese Med, Hefei 230012, Anhui, Peoples R China 5.Hubei Univ Chinese Med, Wuhan 430065, Hubei, Peoples R China 6.Yunnan Acad Agr Sci, Inst Med Bot, Kunming 650223, Yunnan, Peoples R China |
| Recommended Citation GB/T 7714 | Yuan, Yuan,Jin, Xiaohua,Liu, Juan,et al. The Gastrodia elata genome provides insights into plant adaptation to heterotrophy[J]. NATURE COMMUNICATIONS,2018,9. |
| APA | Yuan, Yuan.,Jin, Xiaohua.,Liu, Juan.,Zhao, Xing.,Zhou, Junhui.,...&Huang, Luqi.(2018).The Gastrodia elata genome provides insights into plant adaptation to heterotrophy.NATURE COMMUNICATIONS,9. |
| MLA | Yuan, Yuan,et al."The Gastrodia elata genome provides insights into plant adaptation to heterotrophy".NATURE COMMUNICATIONS 9(2018). |
| Files in This Item: | ||||||
| File Name/Size | DocType | Version | Access | License | ||
| Yuan-2018-The Gastro（1478KB） | 期刊论文 | 出版稿 | 开放获取 | CC BY-NC-SA | View Application Full Text | |
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