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| Characterization of the Ubiquitin C-Terminal Hydrolase and Ubiquitin-Specific Protease Families in Rice (Oryza sativa) | |
| Wang, Dong-Hui; Song, Wei; Wei, Shao-Wei; Zheng, Ya-Feng; Chen, Zhi-Shan; Han, Jing-Dan; Zhang, Hong-Tao; Luo, Jing-Chu; Qin, Yong-Mei; Xu, Zhi-Hong; Bai, Shu-Nong | |
| 2018 | |
| 发表期刊 | FRONTIERS IN PLANT SCIENCE
 |
| ISSN | 1664-462X |
| 卷号 | 9 |
| 摘要 | The ubiquitin C-terminal hydrolase (UCH) and ubiquitin-specific processing protease (UBP) protein families both function in protein deubiquitination, playing important roles in a wide range of biological processes in animals, fungi, and plants. Little is known about the functions of these proteins in rice (Oryza sativa), and the numbers of genes reported for these families have not been consistent between different rice database resources. To further explore their functions, it is necessary to first clarify the basic molecular and biochemical nature of these two gene families. Using a database similarity search, we clarified the numbers of genes in these two families in the rice genome, examined the enzyme activities of their corresponding proteins, and characterized the expression patterns of all OsUCH and representative OsUBP genes. Five OsUCH and 44 OsUBP genes were identified in the rice genome, with four OsUCH proteins and 10 of 16 tested representative OsUBP proteins showing enzymatic activities. Two OsUCHs and five OsUBPs were found to be preferentially expressed in the early development of rice stamens. This work thus lays down a reliable bioinformatic foundation for future investigations of genes in these two families, particularly for exploring their potential roles in rice stamen development. |
| 关键词 | ubiquitin C-terminal hydrolase ubiquitin-specific protease enzyme activity rice stamen male fertility |
| 学科领域 | Plant Sciences |
| DOI | 10.3389/fpls.2018.01636 |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS关键词 | DEUBIQUITINATING ENZYMES ; STAMEN DEVELOPMENT ; EXPRESSION ; ARABIDOPSIS ; SPERMATOGENESIS ; ARRESTS ; FLOWERS ; UCH-L1 ; GENES |
| WOS记录号 | WOS:000450170800001 |
| 出版者 | FRONTIERS MEDIA SA |
| 文献子类 | Article |
| 出版地 | LAUSANNE |
| 资助机构 | Ministry of Science and Technology of the People's Republic of ChinaMinistry of Science and Technology, China [2009CB941502, 2013CB126901] ; Ministry of Agriculture of the People's Republic of ChinaMinistry of Agriculture, China [2016ZX08009-003] ; National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [31370343] |
| 作者邮箱 | shunongb@pku.edu.cn |
| 作品OA属性 | Green Published, gold |
| 引用统计 | |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.ibcas.ac.cn/handle/2S10CLM1/20331 |
| 专题 | 系统与进化植物学国家重点实验室 |
| 作者单位 | 1.[Wang, Dong-Hui 2.Song, Wei 3.Wei, Shao-Wei 4.Zheng, Ya-Feng 5.Chen, Zhi-Shan 6.Zhang, Hong-Tao 7.Luo, Jing-Chu 8.Qin, Yong-Mei 9.Xu, Zhi-Hong 10.Peking Univ, Coll Life Sci, State Key Lab Prot & Plant Gene Res, Beijing, Peoples R China 11.Natl Ctr Plant Gene Res, Beijing, Peoples R China 12.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China |
| 推荐引用方式 GB/T 7714 | Wang, Dong-Hui,Song, Wei,Wei, Shao-Wei,et al. Characterization of the Ubiquitin C-Terminal Hydrolase and Ubiquitin-Specific Protease Families in Rice (Oryza sativa)[J]. FRONTIERS IN PLANT SCIENCE,2018,9. |
| APA | Wang, Dong-Hui.,Song, Wei.,Wei, Shao-Wei.,Zheng, Ya-Feng.,Chen, Zhi-Shan.,...&Bai, Shu-Nong.(2018).Characterization of the Ubiquitin C-Terminal Hydrolase and Ubiquitin-Specific Protease Families in Rice (Oryza sativa).FRONTIERS IN PLANT SCIENCE,9. |
| MLA | Wang, Dong-Hui,et al."Characterization of the Ubiquitin C-Terminal Hydrolase and Ubiquitin-Specific Protease Families in Rice (Oryza sativa)".FRONTIERS IN PLANT SCIENCE 9(2018). |
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