Knowledge Management System Of Institute Of Botany,CAS
Plastid phylogenomic study of grape species and its implications for evolutionary study and conservation of Vitis | |
Mu, Xian-Yun; Shen, Xue-Li; Wu, Yuan-Mi; Zhu, Yi-Xuan; Dong, Shu-Bin; Xia, Xiao-Fei; Lin, Qin-Wen; Fan, Pei-Ge; Liu, Yu-Lin; Zhang, Zhi-Xiang | |
2018 | |
发表期刊 | PHYTOTAXA |
ISSN | 1179-3155 |
卷号 | 364期号:1页码:71-80 |
摘要 | Because of rapid diversification and frequent interspecific gene flow within the genus and inappropriate molecular markers used for phylogenetic studies, phylogeny and evolution of the economically significant crop genus Vitis are poorly resolved and understood, and species delimitation of Vitis remain disputable. In order to better understand of relationships within Vitis, phylogenomic analysis of chloroplast genomes were performed based on extensive sampling scheme. Well resolved phylogenetic tree and clear divergence pattern of Vitis were obtained in the present study. The results shows that subg. Vitis was constituted by three strongly supported monophyletic clades whose species are distributed in North America, Europe and Asia, respectively. Nine molecular markers arc provided as potential markers for DNA barcoding and phylogenetic study of Vitis. Furthermore, taxonomic position of the critically endangered species endemic to Northern China, V baihuashanensis, is investigated and suggested to be a separate species based on phylogenomic analysis and morphological comparisons, and effective conservation actions is badly needed. Molecular resources reported in this study could also be used for genetic engineering studies of Vitis, and will potentially promote genomic exploration of crop wild relatives and conservation of the germplasm. |
关键词 | Vitis phylogenomic complete chloroplast genome Vitis baihuashanensis endangered species China |
学科领域 | Plant Sciences |
DOI | 10.11646/phytotaxa.364.1.4 |
收录类别 | SCI |
语种 | 英语 |
WOS关键词 | NONCODING CHLOROPLAST DNA ; GENOME SEQUENCE ; GENUS VITIS ; TORTOISE ; HARE ; ALGORITHM ; REGIONS |
WOS记录号 | WOS:000441000700004 |
出版者 | MAGNOLIA PRESS |
文献子类 | Article |
出版地 | AUCKLAND |
EISSN | 1179-3163 |
资助机构 | Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [31400193] ; Beijing Natural Science FoundationBeijing Natural Science Foundation [5174031] ; Beijing Excellent Talent Project [2016400685627G234] ; [201710022070] |
作者邮箱 | zxzhang@bffu.edu.cn |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://ir.ibcas.ac.cn/handle/2S10CLM1/20460 |
专题 | 中科院北方资源植物重点实验室 |
作者单位 | 1.[Mu, Xian-Yun 2.Shen, Xue-Li 3.Wu, Yuan-Mi 4.Zhu, Yi-Xuan 5.Beijing Forestry Univ, Coll Nat Conservat, Lab Systemat Evolut & Biogeog Woody Plants, Beijing 100083, Peoples R China 6.Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Beijing 100083, Peoples R China 7.Beijing Museum Nat Hist, Beijing 100050, Peoples R China 8.[Lin, Qin-Wen 9.Chinese Acad Sci, Inst Bot, Beijing 100093, Peoples R China 10.Northwest A&F Univ, Coll Forestry, Yangling 712100, Shaanxi, Peoples R China |
推荐引用方式 GB/T 7714 | Mu, Xian-Yun,Shen, Xue-Li,Wu, Yuan-Mi,et al. Plastid phylogenomic study of grape species and its implications for evolutionary study and conservation of Vitis[J]. PHYTOTAXA,2018,364(1):71-80. |
APA | Mu, Xian-Yun.,Shen, Xue-Li.,Wu, Yuan-Mi.,Zhu, Yi-Xuan.,Dong, Shu-Bin.,...&Zhang, Zhi-Xiang.(2018).Plastid phylogenomic study of grape species and its implications for evolutionary study and conservation of Vitis.PHYTOTAXA,364(1),71-80. |
MLA | Mu, Xian-Yun,et al."Plastid phylogenomic study of grape species and its implications for evolutionary study and conservation of Vitis".PHYTOTAXA 364.1(2018):71-80. |
条目包含的文件 | ||||||
文件名称/大小 | 文献类型 | 版本类型 | 开放类型 | 使用许可 | ||
phytotaxa.364.1.4.pd(3293KB) | 期刊论文 | 出版稿 | 开放获取 | CC BY-NC-SA | 浏览 请求全文 |
除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。
修改评论