Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana

doi:10.1093/gbe/evy171

	Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana
	Li, Zi-Wen ; Hou, Xing-Hui ; Chen, Jia-Fu ; Xu, Yong-Chao ; Wu, Qiong ; Gonzalez, Josefa 2; Guo, Ya-Long
	2018
发表期刊	GENOME BIOLOGY AND EVOLUTION
ISSN	1759-6653
卷号	10 期号:8 页码:2140-2150
摘要	Transposable elements (TEs) are mobile genetic elements with very high mutation rates that play important roles in shaping genome architecture and regulating phenotypic variation. However, the extent to which TEs influence the adaptation of organisms in their natural habitats is largely unknown. Here, we scanned 201 representative resequenced genomes from the model plant Arabidopsis thaliana and identified 2,311 polymorphic TEs from noncentromeric regions. We found expansion and contraction of different types of TEs in different A. thaliana populations. More importantly, we identified two TE insertions that are likely candidates to play a role in adaptive evolution. Our results highlight the importance of variations in TEs for the adaptation of plants in general in the context of rapid global climate change.
关键词	Arabidopsis thaliana population genomics adaptation transposable elements (TEs)
学科领域	Evolutionary Biology ; Genetics & Heredity
DOI	10.1093/gbe/evy171
收录类别	SCI
语种	英语
WOS关键词	DROSOPHILA-MELANOGASTER ; POSITIVE SELECTION ; GENOME EVOLUTION ; GENE-EXPRESSION ; DISCOVERY ; INSERTION ; RESISTANCE ; RESPONSES ; SEQUENCE ; MUTATION
WOS记录号	WOS:000444553900024
出版者	OXFORD UNIV PRESS
文献子类	Article
出版地	OXFORD
资助机构	National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [91231104, 31470331, 31222006] ; 100 Talents Program of the Chinese Academy of SciencesChinese Academy of Sciences ; European CommissionEuropean CommissionEuropean Commission Joint Research Centre [H2020-ERC-2014-CoG-647900] ; Spanish Ministry of Science, Innovation, and Universities [BFU2014-57779-P, BFU2017-82937-P]
作者邮箱	yalong.guo@ibcas.ac.cn
作品OA属性	gold, Green Published, Green Submitted
引用统计	被引频次：45[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.ibcas.ac.cn/handle/2S10CLM1/20625
专题	系统与进化植物学国家重点实验室
作者单位	1.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China 2.Univ Chinese Acad Sci, Coll Life Sci, Beijing, Peoples R China 3.Univ Pompeu Fabra, CSIC, Inst Evolutionary Biol, Barcelona, Spain
推荐引用方式 GB/T 7714	Li, Zi-Wen,Hou, Xing-Hui,Chen, Jia-Fu,et al. Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana[J]. GENOME BIOLOGY AND EVOLUTION,2018,10(8):2140-2150.
APA	Li, Zi-Wen.,Hou, Xing-Hui.,Chen, Jia-Fu.,Xu, Yong-Chao.,Wu, Qiong.,...&Guo, Ya-Long.(2018).Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana.GENOME BIOLOGY AND EVOLUTION,10(8),2140-2150.
MLA	Li, Zi-Wen,et al."Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana".GENOME BIOLOGY AND EVOLUTION 10.8(2018):2140-2150.

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