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Cooperation between Broussonetia papyrifera and Its Symbiotic Fungal Community To Improve Local Adaptation of the Host
Chen, Peilin1; Hu, Yanmin1; Tang, Feng1; Zhao, Meiling1; Peng, Xianjun; Shen, Shihua
2020
发表期刊APPLIED AND ENVIRONMENTAL MICROBIOLOGY
ISSN0099-2240
卷号86期号:18
摘要The genetic basis of plant local adaptation has been extensively studied, yet the interplay between local adaptation, plant genetic divergence, and the microbial community remains unclear. Our study used the restriction-site associated DNA sequencing (RAD-seq) approach to explore genetic divergence in Broussonetia papyrifera and used internal transcribed spacers (ITS) to characterize fungal community. RAD-seq results show that B. papyrifera individuals could be divided into three genotypes; this genotyping result was consistent with the classification of climate type at the sample site. Most of the 101 highly differentiated genes were related to stress resistance and the microbiome. Moreover, p-diversity results indicated that genetic divergence had a significant effect on fungal community across all compartments (P < 0.01). At genus and operational taxonomic unit (OTU) level, Mortierella, Hannaella oryzae, OTU81578 (Mortierella), and OTU1665209 (H. oryzae) were found to be the major OTUs that contribute to differences in fungal community. The properties of cooccurrence networks vary greatly among three genotypes. The results of redundancy analysis (RDA) indicated that B. papyrifera-associated fungal community was significantly related to its local adaptability. Our findings suggest that genetic divergence of 8. papyrifera is closely related to local adaptation, with significant effects on the associated fungal community, which in turn would enhance host local adaptability. This improves present understanding about the coevolution of microbial communities and the host plant. IMPORTANCE The coevolution of plants with the associated fungal community and its effect on plant adaptability are not clear, especially for native trees. This study focuses on the genetic basis of local adaptation in plants and the effect of genetic divergence of Broussonetia papyrifera on the associated fungal community. We identified genes related to the microbiome that are important for local adaptation of the host. Our results show that genetic divergence in B. papyrifera significantly affects the fungal community, which has a close connection with local adaptation. This helps us to understand the relationship between local adaptation, genetic divergence, and associated fungal communities. This study highlights the effect of plant genetic divergence on associated fungal community for native trees and establishes a close connection between this effect and local adaptability in the host. In addition, these observations lay a foundation for the research of coevolution of plants and their symbiotic microbiome through genome-wide association study (GWAS).
关键词B. papyrifera coevolution co-occurrence network fungal community genetic divergence local adaptations
学科领域Biotechnology & Applied Microbiology ; Microbiology
DOI10.1128/AEM.00464-20
收录类别SCI
语种英语
WOS关键词RHIZOSPHERE MICROBIOME ; DIVERSITY ; BACTERIAL ; SOIL ; PATTERNS ; LANDSCAPE ; GENOTYPE ; GENETICS ; WILD ; LEAF
WOS研究方向Biotechnology & Applied Microbiology ; Microbiology
WOS记录号WOS:000566699700003
出版者AMER SOC MICROBIOLOGY
文献子类Article
出版地WASHINGTON
EISSN1098-5336
资助机构ChuangGou Science & Technology Co., Ltd., Beijing, China
作者邮箱pengxianjun@ibcas.ac.cn ; shshen@ibcas.ac.cn
作品OA属性Green Published
引用统计
被引频次:6[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.ibcas.ac.cn/handle/2S10CLM1/21595
专题中科院北方资源植物重点实验室
作者单位1.Chinese Acad Sci, Inst Bot, Key Lab Plant Resources, Beijing, Peoples R China
2.Univ Chinese Acad Sci, Beijing, Peoples R China
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GB/T 7714
Chen, Peilin,Hu, Yanmin,Tang, Feng,et al. Cooperation between Broussonetia papyrifera and Its Symbiotic Fungal Community To Improve Local Adaptation of the Host[J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY,2020,86(18).
APA Chen, Peilin,Hu, Yanmin,Tang, Feng,Zhao, Meiling,Peng, Xianjun,&Shen, Shihua.(2020).Cooperation between Broussonetia papyrifera and Its Symbiotic Fungal Community To Improve Local Adaptation of the Host.APPLIED AND ENVIRONMENTAL MICROBIOLOGY,86(18).
MLA Chen, Peilin,et al."Cooperation between Broussonetia papyrifera and Its Symbiotic Fungal Community To Improve Local Adaptation of the Host".APPLIED AND ENVIRONMENTAL MICROBIOLOGY 86.18(2020).
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