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Microbial macroecology: In search of mechanisms governing microbial biogeographic patterns
Xu, Xiaofeng; Wang, Nannan1,2; Lipson, David; Sinsabaugh, Robert3; Schimel, Josh4; He, Liyuan; Soudzilovskaia, Nadejda A.; Tedersoo, Leho6
2020
发表期刊GLOBAL ECOLOGY AND BIOGEOGRAPHY
ISSN1466-822X
卷号29期号:11页码:1870-1886
摘要Introduction Rapidly advancing technologies and accumulating information about microbial communities across the globe allow the quantification of microbial properties and functions at a macro-scale. These emerging microbial biogeographic patterns call for a practical macroecological approach to investigate their underlying mechanisms. Aims The primary aims of this paper are to review the advancements of microbial macroecology in seeking mechanisms governing microbial biogeographic patterns, and to further lay out a roadmap for microbial macroecology in 10 years. Methods We reviewed the progress of microbial macroecology and demonstrated the application of the microbial macroecological approach to microbial biogeographic patterns with three case studies. Results Microbial macroecology provides a platform for understanding microbial abundance, community structure, and functioning across space, time, and taxonomic hierarchy. It emphasizes the integral effects of environmental filtering, microbial responses, diversification, dispersal, and local extinction that drive the microbial biogeographic patterns. The microbial macroecological approach emphasizes the last two stages of the four-stage scientific method applied to microbial ecology: (a) describing microbial traits across scales to reveal patterns, (b) mathematically representing these patterns, (c) developing and testing conceptual models to build a mechanistic understanding of these patterns from a macroecological perspective, (d) plugging the new knowledge into the theoretical advancements. Three case studies were used to demonstrate the microbial macroecological approach for understanding the global patterns of microbial biomass carbon, microbial composition (fungi : bacteria ratio), and microbial carbon use efficiency. Conclusions Microbial macroecology offers a platform for understanding the mechanisms that drive biogeographic patterns of microbial abundance, diversity and functions. It is likely that these patterns and mechanisms will be increasingly incorporated into predictive models that link climate, carbon dynamics, and biogeochemical processes. A roadmap is outlined for the growing microbial macroecology field; we expect significant progress will be made in five research directions over the next 10 years.
关键词biogeography macroecology microbes pattern soil
学科领域Ecology ; Geography, Physical
DOI10.1111/geb.13162
收录类别SCI
语种英语
WOS关键词CARBON-USE EFFICIENCY ; BETA-DIVERSITY ; BACTERIAL COMMUNITIES ; DISPERSAL LIMITATION ; AREA RELATIONSHIP ; GLOBAL PATTERNS ; SOIL ; FUNGAL ; STOICHIOMETRY ; EVOLUTION
WOS研究方向Environmental Sciences & Ecology ; Physical Geography
WOS记录号WOS:000555280600001
出版者WILEY
文献子类Article
出版地HOBOKEN
EISSN1466-8238
资助机构CSU Program for Education & Research in Biotechnology ; Biological and Environmental Research ; San Diego State University ; Top Notch program in China
作者邮箱xxu@sdsu.edu
作品OA属性Bronze
引用统计
被引频次:52[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.ibcas.ac.cn/handle/2S10CLM1/21649
专题植被与环境变化国家重点实验室
作者单位1.San Diego State Univ, Dept Biol, San Diego, CA 92182 USA
2.Chinese Acad Sci, Northeast Inst Geog & Agroecol, Changchun, Peoples R China
3.Chinese Acad Sci, Inst Bot, Beijing, Peoples R China
4.Univ New Mexico, Dept Biol, Albuquerque, NM 87131 USA
5.Univ Calif Santa Barbara, Dept Ecol Evolut & Marine Biol, Santa Barbara, CA 93106 USA
6.Soudzilovskaia, Nadejda A.] Leiden Univ, Inst Environm Sci, Environm Biol Dept, CML, Leiden, Netherlands
7.Univ Tartu, Inst Ecol & Earth Sci, Tartu, Estonia
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Xu, Xiaofeng,Wang, Nannan,Lipson, David,et al. Microbial macroecology: In search of mechanisms governing microbial biogeographic patterns[J]. GLOBAL ECOLOGY AND BIOGEOGRAPHY,2020,29(11):1870-1886.
APA Xu, Xiaofeng.,Wang, Nannan.,Lipson, David.,Sinsabaugh, Robert.,Schimel, Josh.,...&Tedersoo, Leho.(2020).Microbial macroecology: In search of mechanisms governing microbial biogeographic patterns.GLOBAL ECOLOGY AND BIOGEOGRAPHY,29(11),1870-1886.
MLA Xu, Xiaofeng,et al."Microbial macroecology: In search of mechanisms governing microbial biogeographic patterns".GLOBAL ECOLOGY AND BIOGEOGRAPHY 29.11(2020):1870-1886.
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