IB-CAS  > 系统与进化植物学国家重点实验室
An updated Chinese vascular plant tree of life: Phylogenetic diversity hotspots revisited
Hu, Hai-Hua; Liu, Bing2; Liang, Yi-Shuo; Ye, Jian-Fei; Saqib, Saddam1; Meng, Zhen4; Lu, Li-Min; Chen, Zhi-Duan
2020
Source PublicationJOURNAL OF SYSTEMATICS AND EVOLUTION
ISSN1674-4918
Volume58Issue:5Pages:663-672
AbstractLarge-scale phylogenies provide a framework for interdisciplinary investigations in taxonomy, evolutionary biology, biogeography, ecology, and conservation. Integration of regional tree of life and species distribution data has greatly promoted spatial phylogenetic studies on biodiversity, floristic assembly, and biogeographic regionalization. In this study, we updated the phylogenetic tree of Chinese vascular plants by integrating data from public databases and sequences newly generated by our laboratory, to facilitate the exploration of floristic and ecological questions at a country scale. A phylogenetic tree with 15 092 tips and 14 878 species was obtained, including 13 663 species (44.0%) and 2953 genera (95.7%) native to China. Only two families (Corsiaceae and Mitrastemonaceae) and 133 genera native to China are not sampled in this study. Low proportion of sampling is detected in orders with high species diversity and those with low species diversity. The Hengduan Mountains, plus the western Qinghai-Tibet Plateau and western Xinjiang, show the greatest gap of target molecular data for angiosperms. Our phylogeny of Chinese vascular plants recovers relationships among and within major lineages that are highly congruent with published phylogenies at a broader scale. Most families (98.7%) are supported as monophyletic, and 573 genera (17.9%) are recognized as non-monophyletic. Finally, hotspots of phylogenetic diversity for the Chinese angiosperms at both the genus and species levels are identified based on our phylogram, implicating conservation priorities for phylogenetic diversity. The updated phylogeny of Chinese vascular plants is publically available to generate subtrees through our automated phylogeny assembly tool SoTree in the DarwinTree platform ().
KeywordChina phylogenetic diversity hotspots phylogram SoTree species-level tree vascular plant
Subject AreaPlant Sciences
DOI10.1111/jse.12642
Indexed BySCI
Language英语
WOS KeywordCLASSIFICATION ; UPLIFT ; ANGIOSPERMS ; EVOLUTION ; RADIATION ; ENDEMISM ; SEQUENCE ; HISTORY ; GROWTH ; RATES
WOS Research AreaPlant Sciences
WOS IDWOS:000545442500001
PublisherWILEY
Special IssueSI
SubtypeArticle
Publication PlaceHOBOKEN
EISSN1759-6831
Funding OrganizationStrategic Priority Research Program of CAS [XDB31000000, XDA19050103] ; National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [31590822, 31800178] ; Sino-Africa Joint Research Center, CAS International Research and Education Development Program [SAJC201613] ; Young Elite Scientist Sponsorship Program by CAST [2018QNRC001] ; Youth Innovation Promotion Association CAS [2020080]
Corresponding Author Emailliminlu@ibcas.ac.cn ; zhiduan@ibcas.ac.cn
OABronze
Citation statistics
Cited Times:13[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.ibcas.ac.cn/handle/2S10CLM1/21698
Collection系统与进化植物学国家重点实验室
Affiliation1.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing 100093, Peoples R China
2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
3.Chinese Acad Sci, Sino Africa Joint Res Ctr, Wuhan 430074, Peoples R China
4.Chinese Acad Sci, Beijing Bot Garden, Inst Bot, Beijing 100093, Peoples R China
5.Chinese Acad Sci, Comp Network Informat Ctr, Beijing 100190, Peoples R China
Recommended Citation
GB/T 7714
Hu, Hai-Hua,Liu, Bing,Liang, Yi-Shuo,et al. An updated Chinese vascular plant tree of life: Phylogenetic diversity hotspots revisited[J]. JOURNAL OF SYSTEMATICS AND EVOLUTION,2020,58(5):663-672.
APA Hu, Hai-Hua.,Liu, Bing.,Liang, Yi-Shuo.,Ye, Jian-Fei.,Saqib, Saddam.,...&Chen, Zhi-Duan.(2020).An updated Chinese vascular plant tree of life: Phylogenetic diversity hotspots revisited.JOURNAL OF SYSTEMATICS AND EVOLUTION,58(5),663-672.
MLA Hu, Hai-Hua,et al."An updated Chinese vascular plant tree of life: Phylogenetic diversity hotspots revisited".JOURNAL OF SYSTEMATICS AND EVOLUTION 58.5(2020):663-672.
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