The hornwort genome and early land plant evolution

doi:10.1038/s41477-019-0588-4

	The hornwort genome and early land plant evolution
	Zhang, Jian ; Fu, Xin-Xing ; Li, Rui-Qi ; Zhao, Xiang ; Liu, Yang ; Li, Ming-He ; Zwaenepoel, Arthur 7,8; Ma, Hong 9; Goffinet, Bernard 10; Guan, Yan-Long ; Xue, Jia-Yu ; Liao, Yi-Ying ; Wang, Qing-Feng ; Wang, Qing-Hua ; Wang, Jie-Yu ; Zhang, Guo Qiang ; Wang, Zhi-Wen ; Jia, Yu ; Wang, Mei-Zhi ; Dong, Shan-Shan ; Yang, Jian-Fen ; Jiao, Yuan-Nian; Guo, Ya-Long; Kong, Hong-Zhi; Lu, An-Ming ; Yang, Huan-Ming ; Zhang, Shou-Zhou ; Van de Peer, Yves 7,8,16,17; Liu, Zhong-Jian ; Chen, Zhi-Duan
	2020
发表期刊	NATURE PLANTS
ISSN	2055-026X
卷号	6 期号:2 页码:107-118
摘要	Hornworts, liverworts and mosses are three early diverging clades of land plants, and together comprise the bryophytes. Here, we report the draft genome sequence of the hornwort Anthoceros angustus. Phylogenomic inferences confirm the monophyly of bryophytes, with hornworts sister to liverworts and mosses. The simple morphology of hornworts correlates with low genetic redundancy in plant body plan, while the basic transcriptional regulation toolkit for plant development has already been established in this early land plant lineage. Although the Anthoceros genome is small and characterized by minimal redundancy, expansions are observed in gene families related to RNA editing, UV protection and desiccation tolerance. The genome of A. angustus bears the signatures of horizontally transferred genes from bacteria and fungi, in particular of genes operating in stress-response and metabolic pathways. Our study provides insight into the unique features of hornworts and their molecular adaptations to live on land. A draft genome sequence of the hornwort Anthoceros augustus confirms the phylogenetic relationships among the three clades of bryophytes and provides insight into the unique characteristics of hornworts and their adaptations to live on land.
学科领域	Plant Sciences
DOI	10.1038/s41477-019-0588-4
收录类别	SCI
语种	英语
WOS关键词	PENTATRICOPEPTIDE REPEAT PROTEINS ; PHYSCOMITRELLA-PATENS ; TRANSCRIPTION FACTORS ; GENE ; REVEALS ; SEQUENCE ; IDENTIFICATION ; BRYOPHYTES ; PREDICTION ; INSIGHTS
WOS研究方向	Plant Sciences
WOS记录号	WOS:000512529000001
出版者	NATURE RESEARCH
文献子类	Article
出版地	BERLIN
EISSN	2055-0278
资助机构	Sino-Africa Joint Research Center, Chinese Academy of Sciences, CAS International Research and Education Development Program [SAJC201613] ; Strategic Priority Research Program of the Chinese Academy of SciencesChinese Academy of Sciences [XDB31000000, XDA19050103] ; National Natural Science Foundation of China (NNSF)National Natural Science Foundation of China (NSFC) [31590822] ; Shenzhen Fairy Lake Botanical Garden, State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences ; Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry University ; European Union Seventh Framework Programme (FP7/2007-2013) under European Research Council [322739-DOUBLEUP]
作者邮箱	shouzhouz@126.com ; yves.vandepeer@psb.vib-ugent.be ; zjliu@fafu.edu.cn ; zhiduan@ibcas.ac.cn
作品OA属性	Green Published, hybrid
引用统计	被引频次：152[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.ibcas.ac.cn/handle/2S10CLM1/21920
专题	系统与进化植物学国家重点实验室
作者单位	1.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China 2.Univ Chinese Acad Sci, Beijing, Peoples R China 3.PubBio Tech Serv Corp, Wuhan, Peoples R China 4.Fairy Lake Bot Garden, Key Lab Southern Subtrop Plant Divers, Shenzhen, Peoples R China 5.Chinese Acad Sci, Shenzhen, Peoples R China 6.BGI Shenzhen, Shenzhen, Guangdong, Peoples R China 7.Fujian Agr & Forestry Univ, Coll Landscape Architecture, Key Lab Natl Forestry & Grassland Adm Orchid Cons, Fuzhou, Peoples R China 8.Univ Ghent, Dept Plant Biotechnol & Bioinformat, Ghent, Belgium 9.VIB Ctr Plant Syst Biol, Ghent, Belgium 10.Penn State Univ, Dept Biol, Huck Inst Life Sci, University Pk, PA 16802 USA 11.Univ Connecticut, Dept Ecol & Evolutionary Biol, Storrs, CT USA 12.Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Divers & Biogeog East Asia, Kunming, Yunnan, Peoples R China 13.Inst Bot, Ctr Plant Divers & Systemat, Nanjing, Jiangsu, Peoples R China 14.Chinese Acad Sci, Nanjing, Peoples R China 15.Chinese Acad Sci, Sino Africa Joint Res Ctr, Wuhan, Peoples R China 16.South China Agr Univ, Coll Forestry & Landscape Architecture, Guangzhou, Peoples R China 17.Ctr Microbial Ecol & Genom, Dept Biochem Genet & Microbiol, Pretoria, South Africa 18.Nanjing Agr Univ, Coll Hort, Nanjing, Peoples R China 19.Fujian Agr & Forestry Univ, Fujian Coll & Univ Engn Res Inst Conservat & Util, Coll Forestry, Fuzhou, Peoples R China
推荐引用方式 GB/T 7714	Zhang, Jian,Fu, Xin-Xing,Li, Rui-Qi,et al. The hornwort genome and early land plant evolution[J]. NATURE PLANTS,2020,6(2):107-118.
APA	Zhang, Jian.,Fu, Xin-Xing.,Li, Rui-Qi.,Zhao, Xiang.,Liu, Yang.,...&Chen, Zhi-Duan.(2020).The hornwort genome and early land plant evolution.NATURE PLANTS,6(2),107-118.
MLA	Zhang, Jian,et al."The hornwort genome and early land plant evolution".NATURE PLANTS 6.2(2020):107-118.

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