The complete chloroplast genome sequence of Populus wilsonii and its phylogenetic analysis

doi:10.1038/s41598-017-07744-1

	The complete chloroplast genome sequence of Populus wilsonii and its phylogenetic analysis
	Han, Xue-Min ; Wang, Yi-Ming ; Liu, Yan-Jing
	2017
发表期刊	MITOCHONDRIAL DNA PART B-RESOURCES
卷号	2 期号:2 页码:932-933
摘要	The complete chloroplast genome of Populus wilsonii was reconstructed by reference-based assembly using whole-genome sequencing data. The total chloroplast genome size of P. wilsonii was 158,080 bp in length, including a pair of inverted repeat regions (IRs) of 27,749 bp each, a large single-copy region (LSC) of 85,949 bp and a small single-copy region (SSC) of 16,633 bp. A total of 133 genes were predicted from the chloroplast genome, including 86 protein-coding genes, 39 tRNA genes and eight rRNA genes. Among these genes, 20 genes occurred in IRs, containing nine protein-coding genes, seven tRNA genes and four rRNA genes. The GC content of P. wilsonii chloroplast genome was 36.6%. The phylogenetic analysis with 15 other species showed that P. wilsonii was closely clustered with Populus cathayana. The complete chloroplast genome of P. wilsonii provides new insights into Populus evolutionary and genomic studies.
关键词	Populus wilsonii chloroplast genome phylogenetic analysis whole-genome sequencing
学科领域	Science & Technology - Other Topics
DOI	10.1038/s41598-017-07744-1
收录类别	SCI
语种	英语
WOS记录号	WOS:000407179800010
出版者	TAYLOR & FRANCIS LTD
文献子类	Article
出版地	ABINGDON
EISSN	2380-2359
资助机构	National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [31500547]
作者邮箱	yanjing.liu@ibcas.ac.cn
作品OA属性	gold, Green Published
引用统计	被引频次：8[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.ibcas.ac.cn/handle/2S10CLM1/22256
专题	系统与进化植物学国家重点实验室
作者单位	1.[Han, Xue-Min 2.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China 3.Univ Chinese Acad Sci, Beijing, Peoples R China 4.Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Beijing, Peoples R China
推荐引用方式 GB/T 7714	Han, Xue-Min,Wang, Yi-Ming,Liu, Yan-Jing. The complete chloroplast genome sequence of Populus wilsonii and its phylogenetic analysis[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2017,2(2):932-933.
APA	Han, Xue-Min,Wang, Yi-Ming,&Liu, Yan-Jing.(2017).The complete chloroplast genome sequence of Populus wilsonii and its phylogenetic analysis.MITOCHONDRIAL DNA PART B-RESOURCES,2(2),932-933.
MLA	Han, Xue-Min,et al."The complete chloroplast genome sequence of Populus wilsonii and its phylogenetic analysis".MITOCHONDRIAL DNA PART B-RESOURCES 2.2(2017):932-933.

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