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| An updated tribal classification of Lamiaceae based on plastome phylogenomics | |
| Zhao, Fei; Chen, Ya-Ping; Salmaki, Yasaman1; Drew, Bryan T.; Wilson, Trevor C.; Scheen, Anne-Cathrine; Celep, Ferhat5,6; Braeuchler, Christian7; Bendiksby, Mika8,9; Wang, Qiang10; Min, Dao-Zhang; Peng, Hua; Olmstead, Richard G.; Li, Bo11; Xiang, Chun-Lei | |
| 2021 | |
| 发表期刊 | BMC BIOLOGY
 |
| 卷号 | 19期号:1 |
| 摘要 | Background: A robust molecular phylogeny is fundamental for developing a stable classification and providing a solid framework to understand patterns of diversification, historical biogeography, and character evolution. As the sixth largest angiosperm family, Lamiaceae, or the mint family, consitutes a major source of aromatic oil, wood, ornamentals, and culinary and medicinal herbs, making it an exceptionally important group ecologically, ethnobotanically, and floristically. The lack of a reliable phylogenetic framework for this family has thus far hindered broad-scale biogeographic studies and our comprehension of diversification. Although significant progress has been made towards clarifying Lamiaceae relationships during the past three decades, the resolution of a phylogenetic backbone at the tribal level has remained one of the greatest challenges due to limited availability of genetic data. Results: We performed phylogenetic analyses of Lamiaceae to infer relationships at the tribal level using 79 protein-coding plastid genes from 175 accessions representing 170 taxa, 79 genera, and all 12 subfamilies. Both maximum likelihood and Bayesian analyses yielded a more robust phylogenetic hypothesis relative to previous studies and supported the monophyly of all 12 subfamilies, and a classification for 22 tribes, three of which are newly recognized in this study. As a consequence, we propose an updated phylogenetically informed tribal classification for Lamiaceae that is supplemented with a detailed summary of taxonomic history, generic and species diversity, morphology, synapomorphies, and distribution for each subfamily and tribe. Conclusions: Increased taxon sampling conjoined with phylogenetic analyses based on plastome sequences has provided robust support at both deep and shallow nodes and offers new insights into the phylogenetic relationships among tribes and subfamilies of Lamiaceae. This robust phylogenetic backbone of Lamiaceae will serve as a framework for future studies on mint classification, biogeography, character evolution, and diversification. |
| 关键词 | Lamiaceae Lamioideae Mints Phylogenomics Tribal relationships |
| 学科领域 | Biology |
| DOI | 10.1186/s12915-020-00931-z |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS关键词 | COMPLETE CHLOROPLAST GENOME ; HAWAIIAN ENDEMIC MINTS ; MOLECULAR PHYLOGENY ; POLLEN MORPHOLOGY ; CLERODENDRUM LAMIACEAE ; LAMIOIDEAE LAMIACEAE ; STACHYDEAE LAMIACEAE ; CHARACTER EVOLUTION ; STAMINAL EVOLUTION ; PERICARP STRUCTURE |
| WOS研究方向 | Science Citation Index Expanded (SCI-EXPANDED) |
| WOS记录号 | WOS:000606281500001 |
| 出版者 | BMC |
| 文献子类 | Article |
| 出版地 | LONDON |
| EISSN | 1741-7007 |
| 资助机构 | Yunnan Fundamental Research Projects [2019FI009] ; Ten Thousand Talents Program of Yunnan [YNWR-QNBJ-2018-279] ; CAS Light of West China program ; Australian Biological Resources Study National Taxonomy Research Grant Program [RG19-17] ; NSF [DEB-1655611] ; Postdoctoral Research Program (TUBITAK-BIDEB 2219) |
| 作者邮箱 | hanbolijx@163.com ; xiangchunlei@mail.kib.ac.cn |
| 作品OA属性 | gold, Green Published |
| 引用统计 | |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.ibcas.ac.cn/handle/2S10CLM1/26534 |
| 专题 | 系统与进化植物学国家重点实验室 |
| 作者单位 | 1.Chinese Acad Sci, Kunming Inst Bot, CAS Key Lab Plant Div & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China 2.Univ Tehran, Dept Plant Sci, Coll Sci, Ctr Excellence Phylogeny Living Organisms, POB 14155-6455, Tehran, Iran 3.Drew, Bryan T.] Univ Nebraska, Dept Biol, Kearney, NE 68849 USA 4.Wilson, Trevor C.] Australian Inst Bot Sci, Natl Herbarium New South Wales, Royal Bot Gardens & Domain Trust, Sydney, NSW, Australia 5.Univ Stavanger, Museum Archaeol, NO-4036 Stavanger, Norway 6.Kirikkale Univ, Fac Arts & Sci, Dept Biol, Kirikkale, Turkey 7.Univ Wisconsin, Dept Bot, Madison, WI 53706 USA 8.Nat Hist Museum Vienna, Dept Bot, Burgring 7, A-1010 Vienna, Austria 9.Norwegian Univ Sci & Technol, NTNU Univ Museum, N-7491 Trondheim, Norway 10.Univ Oslo, Nat Hist Museum, Oslo, Norway 11.Chinense Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing 100093, Peoples R China 12.Jiangxi Agr Univ, Coll Agron, Res Ctr Ecol Sci, Nanchang 330045, Jiangxi, Peoples R China 13.Olmstead, Richard G.] Univ Washington, Dept Biol, Seattle, WA 98195 USA |
| 推荐引用方式 GB/T 7714 | Zhao, Fei,Chen, Ya-Ping,Salmaki, Yasaman,et al. An updated tribal classification of Lamiaceae based on plastome phylogenomics[J]. BMC BIOLOGY,2021,19(1). |
| APA | Zhao, Fei.,Chen, Ya-Ping.,Salmaki, Yasaman.,Drew, Bryan T..,Wilson, Trevor C..,...&Xiang, Chun-Lei.(2021).An updated tribal classification of Lamiaceae based on plastome phylogenomics.BMC BIOLOGY,19(1). |
| MLA | Zhao, Fei,et al."An updated tribal classification of Lamiaceae based on plastome phylogenomics".BMC BIOLOGY 19.1(2021). |
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