IB-CAS  > 中科院北方资源植物重点实验室
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021
Xue, Yongbiao1; Bao, Yiming1,3; Zhang, Zhang1,3; Zhao, Wenming1,3; Xiao, Jingfa1,3; He, Shunmin4,5,6; Zhang, Guoqing7,8; Li, Yixue7,8; Zhao, Guoping7,8,9,10; Chen, Runsheng5,6,11; Song, Shuhui1,3; Ma, Lina1,3; Zou, Dong1,3; Tian, Dongmei1,3; Li, Cuiping1,3; Zhu, Junwei1,3; Gong, Zheng1,3; Chen, Meili1,3; Wang, Anke1,3; Ma, Yingke1,3; Li, Mengwei1,3; Teng, Xufei1,3; Cui, Ying1,3; Duan, Guangya1,3; Zhang, Mochen1,3,16; Jin, Tong1,3; Shi, Chengmin12; Du, Zhenglin1,3; Zhang, Yadong1,3; Liu, Chuandong12; Li, Rujiao1,3; Zeng, Jingyao1,3; Hao, Lili1,3; Jiang, Shuai1,3; Chen, Hua12; Han, Dali12; Yongbiao, Xue1; Zhang, Tao1,3; Kang, Wang12; Qu, Jing14; Zhang, Weiqi1,12; Liu, Guang-Hui; Liu, Lin1,3; Zhang, Yang1,3; Niu, Guangyi1,3; Zhu, Tongtong1,3,16; Feng, Changrui1,3; Liu, Xiaonan1,3,16; Zhang, Yuansheng1,3; Li, Zhao1,3,16; Chen, Ruru1,3,17; Li, Qianpeng1,3; Hua, Zhongyi18; Jiang, Chao18; Chen, Ziyuan18; He, Fangshu18; Zhao, Yuyang18; Jin, Yan18; Huang, Luqi18; Yuan, Yuan18; Zhou, Chenfen7,8; Xu, Qingwei19; He, Sheng7,8,20; Ye, Wei7,8; Cao, Ruifang7,8; Wang, Pengyu7,8; Ling, Yunchao7,8; Yan, Xing9; Wang, Qingzhong7,8; Du, Qiang1,3; Zong, Wenting1,3; Kang, Hongen1,3; Xiong, Zhuang1,3; Huan, Wendi7,8; Zhang, Sirui7,8; Xia, Qiguang7,8; Fan, Xiaojuan7,8; Wang, Zefeng7,8,21; Chen, Xu1,3; Chen, Tingting1,3; Zhang, Sisi1,3; Tang, Bixia1,3; Dong, Lili1,3; Zhang, Zhewen1,3; Wang, Zhonghuang1,3; Kang, Hailong1,3; Wang, Yanqing1,3; Wu, Song1,3; Wang, Honggen1,3; Chen, Ming1,3,16; Liu, Chang1,3; Xiong, Yujia22,23; Shao, Xueying24; Li, Yanyan5,6,25; Zhou, Honghong5,6; Chen, Xiaomin5,6; Zheng, Yu5,6,25; Kang, Quan5,6; Hao, Di5,6; Zhang, Lili5,6; Luo, Huaxia5,6; Hao, Yajing5,6; Zhang, Peng5,6; Nie, Zhi1,3; Yu, Shuhuan1,3; Yang, Fei1,3; Sang, Jian1,3; Li, Zhaohua1,3,16; Zhang, Xiangquan26; Zhou, Qing1,3; Zhai, Shuang1,3; Zhang, Yaping26; Wang, Guodong26; Zhu, Qianghui27; Li, Xin27; Li, Menghua27,28; Yan, Jun29; Li, Chen30; Wang, Zhennan31; Wang, Xiangfeng29; Liu, Yuanming32; Luo, Hong32; Wu, Xiaoyuan32; Jing, HaiChun32,33; Song, Tinrui5,6; Zhao, Yi4; Mehmood, Furrukh; Ali, Shahid; Ali, Amjad35; Saleem, Shoaib; Hussain, Irfan; Abbasi, Amir A.; Zuo, Zhixiang36; Ren, Jian36; Zhang, Xinxin37; Xiao, Yun37; Li, Xia37; Tu, Yiran; Xue, Yu; Wu, Wanying39; Ji, Peifeng39; Zhao, Fangqing39; Meng, Xianwen40; Peng, Di; Luo, Hao41,42,43,44; Gao, Feng41,42,43,44; Ning, Wanshan; Lin, Shaofeng; Liu, Teng; Guo, An-Yuan; Yuan, Hao; Zhang, Yong E.; Tan, Xiaodan; Zhang, Weizhi; Xie, Yubin36; Wang, Chenwei; Liu, Chun-Jie; Yang, De-Chang; Tian, Feng48,49; Gao, Ge48,49; Tang, Dachao38; Yao, Lan38; Cui, Qinghua50,51; An, Ni A.; Li, Chuan-Yun; Luo, XiaoTong36
2021
Source PublicationNUCLEIC ACIDS RESEARCH
ISSN0305-1048
Volume49Issue:D1Pages:D18-D28
AbstractThe National Genomics Data Center (NGDC), part of the China National Center for Bioinformation (CNCB), provides a suite of database resources to support worldwide research activities in both academia and industry. With the explosive growth of multiomics data, CNCB-NGDC is continually expanding, updating and enriching its core database resources through big data deposition, integration and translation. In the past year, considerable efforts have been devoted to 2019nCoVR, a newly established resource providing a global landscape of SARS-CoV-2 genomic sequences, variants, and haplotypes, as well as Aging Atlas, BrainBase, GTDB (Glycosyltransferases Database), LncExpDB, and TransCirc (Translation potential for circular RNAs). Meanwhile, a series of resources have been updated and improved, including BioProject, BioSample, GWH (Genome Warehouse), GVM (Genome Variation Map), GEN (Gene Expression Nebulas) as well as several biodiversity and plant resources. Particularly, BIG Search, a scalable, one-stop, cross-database search engine, has been significantly updated by providing easy access to a large number of internal and external biological resources from CNCB-NGDC, our partners, EBI and NCBI. All of these resources along with their services are publicly accessible at https://bigd.big.ac.cn.
Subject AreaBiochemistry & Molecular Biology
DOI10.1093/nar/gkaa1022
Indexed BySCI
Language英语
WOS KeywordSEARCH ; RICE
WOS Research AreaScience Citation Index Expanded (SCI-EXPANDED)
WOS IDWOS:000608437800003
PublisherOXFORD UNIV PRESS
SubtypeArticle
Publication PlaceOXFORD
EISSN1362-4962
Funding OrganizationStrategic Priority Research Program of the Chinese Academy of Sciences [XDB38030200, XDA19050302, XDA19090116, XDA24040201, XDB38050300, XDB38030100, XDB38030400, XDA12030100, XDB38040300] ; National Key Research & Development Program of China [2019YFA0801801, 2018YFA0801405, 2018YFD1000505, 2018YFC2000100, 2018YFC1406902, 2018YFC0910400, 2018YFC0310602, 2018YFA0903700, 2018YFA0900704, 2017YFC1201200, 2017YFC0908405, 2017YFC0908404, 2017YFC0908403] ; The National Key Research & Development Program of China [2017YFC0907505, 2017YFC0907503, 2017YFC0907502, 2016YFE0206600, 2016YFC0906403, 2016YFC0903003, 2016YFC0901904, 2016YFC0901903, 2016YFC0901702, 2016YFC0901604, 2016YFC0901603, 2016YFB0201702, 2016YFA0501704] ; National Natural Science Foundation of China [91731303, 81670462, 31970565, 31871328, 31871294, 31701117, 31970647, 31801104, 31771465, 31771410, 31771388, 31671360, 81701567, 31571358, 31525014, 1470330] ; The National Natural Science Foundation of China [31961130380, 31711530221, 31771477, 31571366, 31822030, 31801113, 31801154, 31771458, 91940303, 91940306, 31661143031, 31730110, 31871281, 31970634, 31930021, 31970633] ; International Partnership Programof the Chinese Academy of Sciences [153F11KYSB20160008, 153D31KYSB20170121] ; 13th Five-year Informatization Plan of Chinese Academy of Sciences [XXH13505-05] ; Genomics Data Center Construction of Chinese Academy of Sciences [XXH-13514-0202] ; Fundamental Research Funds for the Central Universities [2019kfyR-CPY043] ; UK Royal Society-Newton Advanced Fellowship [NAF\R1\191094] ; Key Program of the Chinese Academy of Sciences [KJZD-EW-L14] ; Key Research Program of Frontier Sciences of the Chinese Academy of Sciences [QYZDJ-SSW-SYS009] ; Key Technology Talent Program of the Chinese Academy of Sciences ; 100 Talent Program of the Chinese Academy of Sciences ; K.C. Wong Education Foundation ; Youth Innovation Promotion Association of the Chinese Academy of Sciences [2019104, 2018134, 2017141] ; Special Project on Precision Medicine under the National Key RD Program [SQ2017YFSF090210] ; China Postdoctoral Science Foundation [2019M652623, 2018M632830] ; Open Biodiversity and Health Big Data Program of IUBS ; Professional Association of the Alliance of International Science Organizations [ANSO-PA-2020-07] ; Funds for Basic Resources Investigation Research of the Ministry of Science and Technology [2018FY10080002] ; Special Project on National Science and Technology Basic Resources Investigation [2019FY100102] ; CAS Pioneer 100-Talent program ; Key Research Program of the Chinese Academy of Sciences [KFZD-SW-219-5] ; Zhangjiang special project of national innovation demonstration zone [ZJ2018-ZD-013] ; Science and Technology Service Network Initiative of Chinese Academy of Sciences ; Priority Research Program of the Chinese Academy of Sciences
Corresponding Author Emailybxue@big.ac.cn ; baoym@big.ac.cn ; zhangzhang@big.ac.cn ; zhaowm@big.ac.cn ; xiaojingfa@big.ac.cn ; heshunmin@ibp.ac.cn ; gqzhang@picb.ac.cn ; yxli@sibs.ac.cn ; gpzhao@sibs.ac.cn ; crs@ibp.ac.cn
OAgold, Green Published
Citation statistics
Cited Times:126[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.ibcas.ac.cn/handle/2S10CLM1/26550
Collection中科院北方资源植物重点实验室
Affiliation1.China Natl Ctr Bioinformat, Beijing 100101, Peoples R China
2.Chinese Acad Sci, Natl Genom Data Ctr, Beijing Inst Genom, Beijing 100101, Peoples R China
3.Xue, Yongbiao; Bao, Yiming; Zhang, Zhang; Zhao, Wenming; Xiao, Jingfa; He, Shunmin; Zhang, Guoqing; Li, Yixue; Zhao, Guoping; Song, Shuhui; Gong, Zheng; Li, Mengwei; Teng, Xufei; Cui, Ying; Duan, Guangya; Jin, Tong; Zhang, Yadong; Yongbiao, Xue; Zhang, Tao; Kang, Wang; Qu, Jing; Zhang, Weiqi; Liu, Guang-Hui; Liu, Lin; Zhang, Yang; Niu, Guangyi; Feng, Changrui; Zhang, Yuansheng; Li, Zhao; Li, Qianpeng; Du, Qiang; Zong, Wenting; Kang, Hongen; Xiong, Zhuang; Huan, Wendi; Zhang, Sirui; Xia, Qiguang; Wang, Zefeng; Wang, Zhonghuang; Kang, Hailong; Wu, Song; Wang, Honggen; Liu, Chang; Chen, Xiaomin; Zhang, Lili; Nie, Zhi; Yu, Shuhuan; Yang, Fei; Sang, Jian; Zhou, Qing; Zhu, Qianghui; Wang, Zhennan; Liu, Yuanming; Jing, HaiChun; Zhang, Yong E.] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
4.Chinese Acad Sci, Beijing Inst Genom, CAS Key Lab Genome Sci & Informat, Beijing 100101, Peoples R China
5.Chinese Acad Sci, Inst Comp Technol, Beijing 100190, Peoples R China
6.Chinese Acad Sci, Ctr Big Data Res Hlth, Natl Genom Data Ctr, Inst Biophys, Beijing 100101, Peoples R China
7.Chinese Acad Sci, Ctr Big Data Res Hlth, Key Lab RNA Biol, Inst Biophys, Beijing 100101, Peoples R China
8.Chinese Acad Sci, Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth, CAS MPG Partner Inst Computat Biol,Natl Genom Dat, 320 Yueyang Rd, Shanghai 200031, Peoples R China
9.Chinese Acad Sci, Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth, CAS MPG Partner Inst Computat Biol,Biomed Big Dat, 320 Yueyang Rd, Shanghai 200031, Peoples R China
10.Chinese Acad Sci, CAS Ctr Excellence Mol Plant Sci, Inst Plant Physiol & Ecol, CAS Key Lab Synthet Biol, 300 Fenglin Rd, Shanghai 200032, Peoples R China
11.Chinese Acad Sci, Ctr Quantitat Synthet Biol, Inst Synthet Biol, Shenzhen Inst Adv Technol, Shenzhen, Peoples R China
12.Guangdong Geneway Decoding Biotech Co Ltd, Foshan 528316, Peoples R China
13.Chinese Acad Sci, Beijing Inst Genom, CAS Key Lab Genom & Precis Med, Beijing 100101, Peoples R China
14.Chinese Acad Sci, Inst Stem Cell & Regenerat, Beijing 100101, Peoples R China
15.Chinese Acad Sci, Inst Zool, State Key Lab Stem Cell & Reprod Biol, Beijing 100101, Peoples R China
16.Chinese Acad Sci, Inst Zool, State Key Lab Membrane Biol, Beijing 100101, Peoples R China
17.Univ Chinese Acad Sci, Sch Future Technol, Beijing 100049, Peoples R China
18.Univ Chinese Acad Sci, Sino Danish Coll, Beijing 100049, Peoples R China
19.Chinese Acad Chinese Med Sci CACMS, Natl Resource Ctr Chinese Mat Med, Beijing, Peoples R China
20.Hubei Univ Educ, Coll Comp, 129 Second Gaoxin Rd,Wuhan Hitech Zone, Wuhan 430205, Peoples R China
21.Shanghai Tech Univ, Sch Life Sci & Technol, 393 Middle Huaxia Rd, Shanghai 201210, Peoples R China
22.Chinese Acad Sci, CAS Ctr Excellence Mol Cell Sci, Shanghai 200031, Peoples R China
23.Beijing Neurosurg Inst, Beijing, Peoples R China
24.Capital Med Univ, Beijing, Peoples R China
25.South China Univ Technol, Sch Comp Sci & Engn, Guangzhou, Peoples R China
26.Univ Chinese Acad Sci, Coll Life Sci, Beijing 100049, Peoples R China
27.Chinese Acad Sci, Kunming Inst Zool, State Key Lab Genet Resources & Evolut, Kunming 650223, Yunnan, Peoples R China
28.Chinese Acad Sci, Inst Zool, CAS Key Lab Anim Ecol & Conservat Biol, Beijing 100101, Peoples R China
29.China Agr Univ, Coll Anim Sci & Technol, Beijing 100193, Peoples R China
30.China Agr Univ, Coll Agron & Biotechnol, Dept Crop Genom & Bioinformat, Beijing 100094, Peoples R China
31.Guangdong Acad Agr Sci, Rice Res Inst, Guangzhou 510640, Peoples R China
32.Chinese Acad Sci, Inst Zool, Beijing 100101, Peoples R China
33.Chinese Acad Sci, Inst Bot, Key Lab Plant Resources, Beijing 100093, Peoples R China
34.Chinese Acad Sci, Engn Lab Grass Based Livestock Husb, Beijing 100093, Peoples R China
35.Mehmood, Furrukh; Ali, Shahid; Saleem, Shoaib; Hussain, Irfan; Abbasi, Amir A.] Quaid I Azam Univ, Fac Biol Sci, Islamabad 45320, Pakistan
36.Natl Univ Sci & Technol NUST, Atta Ur Rahman Sch Appl Biosci ASAB, Islamabad 44000, Pakistan
37.Sun Yat Sen Univ, Canc Ctr, Collaborat Innovat Ctr Canc Med, Sch Life Sci, Guangzhou 510060, Peoples R China
38.Harbin Med Univ, Coll Bioinformat Sci & Technol, Harbin 150081, Peoples R China
39.Huazhong Univ Sci & Technol, Coll Life Sci & Technol, Ctr Artificial Intelligence Biol, Key Lab Mol Biophys Minist Educ,Hubei Bioinformat, Wuhan 430074, Peoples R China
40.Chinese Acad Sci, Beijing Inst Life Sci, Beijing 100101, Peoples R China
41.Zhejiang Univ, Hangzhou 310027, Peoples R China
42.Tianjin Univ, Sch Sci, Dept Phys, Tianjin 300072, Peoples R China
43.Tianjin Univ, Frontiers Sci Ctr Synthet Biol, Minist Educ, Tianjin 300072, Peoples R China
44.Tianjin Univ, Key Lab Syst Bioengn, Minist Educ, Tianjin 300072, Peoples R China
45.Collaborat Innovat Ctr Chem Sci & Engn Tianjin, SynBio Res Platform, Tianjin 300072, Peoples R China
46.Yuan, Hao; Zhang, Yong E.] Chinese Acad Sci, Inst Zool, Key Lab Zool Systemat & Evolut, Beijing 100101, Peoples R China
47.Yuan, Hao; Zhang, Yong E.] Chinese Acad Sci, Inst Zool, State Key Lab Integrated Management Pest Insects, Beijing 100101, Peoples R China
48.Yuan, Hao; Zhang, Yong E.] Chinese Acad Sci, CAS Ctr Excellence Anim Evolut & Genet, Kunming 650223, Yunnan, Peoples R China
49.Peking Univ, Biomed Pioneering Innovat Ctr Biop, Beijing Adv Innovat Ctr Genom ICG, Ctr Bioinformat CBI,Sch Life Sci, Beijing 100871, Peoples R China
50.Peking Univ, Sch Life Sci, State Key Lab Prot & Plant Gene Res, Beijing 100871, Peoples R China
51.Peking Univ, Ctr Noncoding RNA Med, Sch Basic Med Sci, Dept Biomed Informat,MOE Key Lab Cardiovasc Sci, Beijing 100190, Peoples R China
52.Univ Elect Sci & Technol China, Ctr Bioinformat, Sch Life Sci & Technol, Key Lab NeuroInformat,Minist Educ, Chengdu 610054, Sichuan, Peoples R China
53.Peking Univ, Inst Mol Med, Beijing Key Lab Cardiometab Mol Med, Beijing, Peoples R China
Recommended Citation
GB/T 7714
Xue, Yongbiao,Bao, Yiming,Zhang, Zhang,et al. Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021[J]. NUCLEIC ACIDS RESEARCH,2021,49(D1):D18-D28.
APA Xue, Yongbiao.,Bao, Yiming.,Zhang, Zhang.,Zhao, Wenming.,Xiao, Jingfa.,...&Luo, XiaoTong.(2021).Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021.NUCLEIC ACIDS RESEARCH,49(D1),D18-D28.
MLA Xue, Yongbiao,et al."Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021".NUCLEIC ACIDS RESEARCH 49.D1(2021):D18-D28.
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