Chromosome-Scale Genome Assembly of the Resurrection Plant Acanthochlamys bracteata (Velloziaceae)

doi:10.1093/gbe/evab147

	Chromosome-Scale Genome Assembly of the Resurrection Plant Acanthochlamys bracteata (Velloziaceae)
	Gao, Zhi-Yuan ; Li, Zhang-Hai ; Lin, Dong-Liang ; Jin, Xiao-Hua
	2021
发表期刊	GENOME BIOLOGY AND EVOLUTION
ISSN	1759-6653
卷号	13 期号:8
摘要	Acanthochlamys bracteata (Velloziaceae) is a resurrection plant with cold tolerance. Herein, a chromosome-level reference genome of A. bracteata based onNanopore, Illumina, and Hi-Cdata is reported. The high-quality assembled genomewas 197.97Mb, with a scaffold N50 value of 8.64Mb and a contig N50 value of 6.96Mb. We annotated 23,509 protein-coding genes. Eight contracted gene families and three expanded gene families were detected. Repeat sequences accounted for approximately 28.63% of the genome. The LEA1 and Dehydrin gene families, which are involved in desiccation resistance, expanded inA. bracteata. We identified genes involved in chilling tolerance, COLD1.
关键词	resurrection plant Acanthochlamys bracteata cold tolerance
学科领域	Evolutionary Biology ; Genetics & Heredity
DOI	10.1093/gbe/evab147
收录类别	SCI
语种	英语
WOS关键词	MULTIPLE SEQUENCE ALIGNMENT ; PHYLOGENETIC ANALYSIS ; WEB SERVER ; ANNOTATION ; TOLERANCE ; DATABASE ; CLASSIFICATION ; IDENTIFICATION ; PROGRAM ; FORMAT
WOS研究方向	Science Citation Index Expanded (SCI-EXPANDED)
WOS记录号	WOS:000690274300016
出版者	OXFORD UNIV PRESS
文献子类	Article
出版地	OXFORD
资助机构	Strategic Priority Research Program of the Chinese Academy of Sciences [XDA19050201] ; National Natural Science Foundation of China [31870195, 31670194]
作者邮箱	xiaohuajin@ibcas.ac.cn
作品OA属性	Green Published, gold
引用统计	被引频次：5[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.ibcas.ac.cn/handle/2S10CLM1/26728
专题	系统与进化植物学国家重点实验室
作者单位	1.[Gao, Zhi-Yuan 2.Lin, Dong-Liang 3.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China 4.Univ Chinese Acad Sci, Beijing, Peoples R China 5.Univ Marburg, Inst Pharmaceut Biol & Biotechnol, Marburg, Germany
推荐引用方式 GB/T 7714	Gao, Zhi-Yuan,Li, Zhang-Hai,Lin, Dong-Liang,et al. Chromosome-Scale Genome Assembly of the Resurrection Plant Acanthochlamys bracteata (Velloziaceae)[J]. GENOME BIOLOGY AND EVOLUTION,2021,13(8).
APA	Gao, Zhi-Yuan,Li, Zhang-Hai,Lin, Dong-Liang,&Jin, Xiao-Hua.(2021).Chromosome-Scale Genome Assembly of the Resurrection Plant Acanthochlamys bracteata (Velloziaceae).GENOME BIOLOGY AND EVOLUTION,13(8).
MLA	Gao, Zhi-Yuan,et al."Chromosome-Scale Genome Assembly of the Resurrection Plant Acanthochlamys bracteata (Velloziaceae)".GENOME BIOLOGY AND EVOLUTION 13.8(2021).

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