Mining plant metabolomes: Methods applications, and perspectives

doi:10.1016/j.xplc.2021.100238

	Mining plant metabolomes: Methods applications, and perspectives
	Ma, Aimin 1; Qi, Xiaoquan1
	2021
发表期刊	PLANT COMMUNICATIONS
ISSN	2590-3462
卷号	2 期号:5
摘要	Plants produce a variety of metabolites that are essential for plant growth and human health. To fully understand the diversity of metabolites in certain plants, lots of methods have been developed for metabolites detection and data processing. In the data-processing procedure, how to effectively reduce false-positive peaks, analyze large-scale metabolic data, and annotate plant metabolites remains challenging. In this review, we introduce and discuss some prominent methods that could be exploited to solve these problems, including a five-step filtering method for reducing false-positive signals in LC-MS analysis, QPMASS for analyzing ultra-large GC-MS data, and MetDNA for annotating metabolites. The main applications of plant metabolomics in species discrimination, metabolic pathway dissection, population genetic studies, and some other aspects are also highlighted. To further promote the development of plant metabolomics, more effective and integrated methods/platforms for metabolite detection and comprehensive databases for metabolite identification are highly needed. With the improvement of these technologies and the development of genomics and transcriptomics, plant metabolomics will be widely used in many fields.
关键词	plant metabolomics metabolites data-processing methods application
学科领域	Biochemistry & Molecular Biology ; Plant Sciences
DOI	10.1016/j.xplc.2021.100238
收录类别	SCI
语种	英语
WOS关键词	MASS-SPECTROMETRY DATA ; GENOME-WIDE ASSOCIATION ; GC/TOF-MS DATA ; GAS-CHROMATOGRAPHY ; NATURAL-PRODUCTS ; DIFFERENT TISSUES ; GENETIC-ANALYSIS ; PEAK DETECTION ; IDENTIFICATION ; TOOL
WOS研究方向	Science Citation Index Expanded (SCI-EXPANDED)
WOS记录号	WOS:000696699600003
出版者	ELSEVIER
文献子类	Review
出版地	AMSTERDAM
资助机构	Strategic Priority Research Program of the Chinese Academy of Sciences [XDB27010202] ; National Natural Science Foundation of China [31920103003] ; National Key Research and Development Program of China [2016YFD0100904]
作者邮箱	xqi@ibcas.ac.cn
作品OA属性	Green Published, gold
引用统计	被引频次：15[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.ibcas.ac.cn/handle/2S10CLM1/26795
专题	中科院植物分子生理学重点实验室
作者单位	1.Chinese Acad Sci, Inst Bot, Key Lab Plant Mol Physiol, Beijing 100093, Peoples R China 2.Chinese Acad Sci, Innovat Acad Seed Design, Beijing 100049, Peoples R China
推荐引用方式 GB/T 7714	Ma, Aimin,Qi, Xiaoquan. Mining plant metabolomes: Methods applications, and perspectives[J]. PLANT COMMUNICATIONS,2021,2(5).
APA	Ma, Aimin,&Qi, Xiaoquan.(2021).Mining plant metabolomes: Methods applications, and perspectives.PLANT COMMUNICATIONS,2(5).
MLA	Ma, Aimin,et al."Mining plant metabolomes: Methods applications, and perspectives".PLANT COMMUNICATIONS 2.5(2021).

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