Genome-Wide Transcriptional Profiles of the Berry Skin of Two Red Grape Cultivars (Vitis vinifera) in Which Anthocyanin Synthesis Is Sunlight-Dependent or -Independent

doi:10.1371/journal.pone.0105959

	Genome-Wide Transcriptional Profiles of the Berry Skin of Two Red Grape Cultivars (Vitis vinifera) in Which Anthocyanin Synthesis Is Sunlight-Dependent or -Independent
	Wu, Ben-Hong ; Cao, Yue-Gang ; Guan, Le 7; Xin, Hai-Ping ; Li, Ji-Hu ; Li, Shao-Hua
	2014
发表期刊	PLOS ONE
ISSN	1932-6203
卷号	9 期号:8
摘要	Global gene expression was analyzed in the berry skin of two red grape cultivars, which can ('Jingyan') or cannot ('Jingxiu') synthesize anthocyanins after sunlight exclusion from fruit set until maturity. Gene transcripts responding to sunlight exclusion in 'Jingyan' were less complex than in 'Jingxiu'; 528 genes were induced and 383 repressed in the former, whereas 2655 genes were induced and 205 suppressed in 'Jingxiu'. They were regulated either in the same or opposing manner in the two cultivars, or in only one cultivar. In addition to VvUFGT and VvMYBA1, some candidate genes (e.g. AOMT, GST, and ANP) were identified which are probably involved in the differential responses of 'Jingxiu' and 'Jingyan' to sunlight exclusion. In addition, 26 MYB, 14 bHLH and 23 WD40 genes responded differently to sunlight exclusion in the two cultivars. Interestingly, all of the 189 genes classified as being relevant to ubiquitin-dependent protein degradation were down-regulated by sunlight exclusion in 'Jingxiu', but the majority (162) remained unchanged in 'Jingyan' berry skin. It would be of interest to determine the precise role of the ubiquitin pathway following sunlight exclusion, particularly the role of COP9 signalosome, cullins, RING-Box 1, and COP1-interacting proteins. Only a few genes in the light signal system were found to be regulated by sunlight exclusion in either or both cultivars. This study provides a valuable overview of the transcriptome changes and gives insight into the genetic background that may be responsible for sunlight-dependent versus independent anthocyanin biosynthesis in berry skin.
学科领域	Multidisciplinary Sciences
DOI	10.1371/journal.pone.0105959
收录类别	SCI
语种	英语
WOS关键词	LIGHT SIGNAL-TRANSDUCTION ; CABERNET-SAUVIGNON GRAPES ; GENE-EXPRESSION ; O-METHYLTRANSFERASES ; PLANT ; BIOSYNTHESIS ; ACCUMULATION ; FRUIT ; PHYTOCHROME ; PROTEINS
WOS研究方向	Science & Technology - Other Topics
WOS记录号	WOS:000341303200081
出版者	PUBLIC LIBRARY SCIENCE
文献子类	Article
出版地	SAN FRANCISCO
资助机构	National Natural Science Foundation of China (NSFC) [31372047, 31071757]
作者邮箱	shhli@ibcas.ac.cn
作品OA属性	gold, Green Published, Green Submitted
引用统计	被引频次：29[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.ibcas.ac.cn/handle/2S10CLM1/27364
专题	中科院北方资源植物重点实验室
作者单位	1.[Wu, Ben-Hong 2.Cao, Yue-Gang 3.Guan, Le 4.Li, Ji-Hu 5.Chinese Acad Sci, Inst Bot, Beijing Key Lab Grape Sci & Enol, Beijing, Peoples R China 6.Chinese Acad Sci, Inst Bot, CAS Key Lab Plant Resources, Beijing, Peoples R China 7.[Cao, Yue-Gang 8.Univ Chinese Acad Sci, Beijing, Peoples R China 9.[Xin, Hai-Ping 10.Chinese Acad Sci, Wuhan Bot Garden, Key Lab Plant Germplasm Enhancement & Special Agr, Wuhan, Peoples R China
推荐引用方式 GB/T 7714	Wu, Ben-Hong,Cao, Yue-Gang,Guan, Le,et al. Genome-Wide Transcriptional Profiles of the Berry Skin of Two Red Grape Cultivars (Vitis vinifera) in Which Anthocyanin Synthesis Is Sunlight-Dependent or -Independent[J]. PLOS ONE,2014,9(8).
APA	Wu, Ben-Hong,Cao, Yue-Gang,Guan, Le,Xin, Hai-Ping,Li, Ji-Hu,&Li, Shao-Hua.(2014).Genome-Wide Transcriptional Profiles of the Berry Skin of Two Red Grape Cultivars (Vitis vinifera) in Which Anthocyanin Synthesis Is Sunlight-Dependent or -Independent.PLOS ONE,9(8).
MLA	Wu, Ben-Hong,et al."Genome-Wide Transcriptional Profiles of the Berry Skin of Two Red Grape Cultivars (Vitis vinifera) in Which Anthocyanin Synthesis Is Sunlight-Dependent or -Independent".PLOS ONE 9.8(2014).

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