New insights into the dispersion history and adaptive evolution of taxon Aegilops tauschii in China

doi:10.1016/j.jgg.2021.11.004

	New insights into the dispersion history and adaptive evolution of taxon Aegilops tauschii in China
	Li, Hao ; Nie, Fang ; Zhu, Lele ; Mu, Menghua ; Fan, Ruixiao ; Li, Jingyao ; Shaheen, Aaqib ; Liu, Yifan ; Li, Can ; Liu, Wenjuan ; Liang, Huihui ; Zhao, Xinpeng ; Bai, Shenglong ; Guo, Guanghui ; Li, Zheng ; Hu, Yiheng 1; Jiao, Yuannian1 ; Adams, Jonathan 2; Distelfeld, Assaf 3; Sun, Guiling ; Li, Suoping ; Zhou, Yun 4; Song, Chun-Peng
	2022
发表期刊	JOURNAL OF GENETICS AND GENOMICS
ISSN	1673-8527
卷号	49 期号:3 页码:185-194
摘要	Aegilops tauschii, the wild progenitor of wheat D-genome and a valuable germplasm for wheat improvement, has a wide natural distribution from eastern Turkey to China. However, the phylogenetic relationship and dispersion history of Ae. tauschii in China has not been scientifically clarified. In this study, we genotyped 208 accessions (with 104 in China) using ddRAD sequencing and 55K SNP array, and classified the population into six sublineages. Three possible spreading routes or events were identified, resulting in specific distribution patterns, with four sublineages found in Xinjiang, one in Qinghai, two in Shaanxi and one in Henan. We also established the correlation of SNP-based, karyotype-based and spike-morphology-based techniques to demonstrate the internal classification of Ae. tauschii, and developed consensus dataset with 1245 putative accessions by merging data previously published. Our analysis suggested that eight inter-lineage accessions could be assigned to the putative Lineage 3 and these accessions would help to conserve the genetic diversity of the species. By developing the consensus phylogenetic relationships of Ae. tauschii, our work validated the hypothesis on the dispersal history of Ae. tauschii in China, and contributed to the efficient and comprehensive germplasm-mining of the species. Copyright (C) 2021, The Authors. Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, and Genetics Society of China. Published by Elsevier Limited and Science Press.
关键词	Aegilops tauschii Consensus dataset Dispersion history Genetic diversity Phylogenetic relationship
学科领域	Biochemistry & Molecular Biology ; Genetics & Heredity
DOI	10.1016/j.jgg.2021.11.004
收录类别	SCI
语种	英语
WOS关键词	WILD WHEAT ; GENOME ; DIVERSITY ; TRITICUM ; DIVERSIFICATION ; PROGENITOR ; SEQUENCES ; ORIGIN
WOS研究方向	Science Citation Index Expanded (SCI-EXPANDED)
WOS记录号	WOS:000774521800002
出版者	SCIENCE PRESS
文献子类	Article
出版地	BEIJING
EISSN	1873-5533
资助机构	National Natural Science Foundation of China [32001492] ; Ministry of Agriculture of China [2016ZX08009] ; Natural Science Foundation of Henan [202300410053]
作者邮箱	zhoumouyun@vip.henu.edu.cn ; songcp@henu.edu.cn
作品OA属性	hybrid
引用统计	被引频次：3[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.ibcas.ac.cn/handle/2S10CLM1/28527
专题	系统与进化植物学国家重点实验室
作者单位	1.Henan Univ, Coll Agr, Sch Life Sci, State Key Lab Crop Stress Adaptat & Improvement, Kaifeng 475004, Henan, Peoples R China 2.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing 100093, Peoples R China 3.Nanjing Univ, Sch Geog & Environm Sci, Nanjing 210023, Jiangsu, Peoples R China 4.Univ Haifa, Dept Evolutionary & Environm Biol, IL-3498838 Haifa, Israel 5.Henan Univ, Shenzhen Res Inst, Shenzhen 518000, Guangdong, Peoples R China
推荐引用方式 GB/T 7714	Li, Hao,Nie, Fang,Zhu, Lele,et al. New insights into the dispersion history and adaptive evolution of taxon Aegilops tauschii in China[J]. JOURNAL OF GENETICS AND GENOMICS,2022,49(3):185-194.
APA	Li, Hao.,Nie, Fang.,Zhu, Lele.,Mu, Menghua.,Fan, Ruixiao.,...&Song, Chun-Peng.(2022).New insights into the dispersion history and adaptive evolution of taxon Aegilops tauschii in China.JOURNAL OF GENETICS AND GENOMICS,49(3),185-194.
MLA	Li, Hao,et al."New insights into the dispersion history and adaptive evolution of taxon Aegilops tauschii in China".JOURNAL OF GENETICS AND GENOMICS 49.3(2022):185-194.

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