Knowledge Management System Of Institute Of Botany,CAS
| Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022 | |
Xue, Yongbiao; Bao, Yiming; Zhang Zhang; Zhao, Wenming; Xiao, Jingfa; He, Shun-min; Zhang, Guoqing; Li, Yixue; Guoping, Zhao8,9; Chen, Runsheng4,5,10; Zeng, Jingyao; Zhang, Yadong; Shang, Yun-fei; Mai, Jialin; Shi, Shuo; Lu, Mingming; Bu, Congfan; Zhang, Zhewen; Du, Zhenglin; Wang, Yinying11; Kang, Hongen11; Xu, Tianyi; Hao, Lili; Jia, Peilin11; Jiang, Shuai; Qian, Qiheng; Zhu, Tong-tong; Shang, Yunfei; Zong, Wenting; Jin, Tong; Zhang, Yuansheng; Zou, Dong; Zhang, Zhang; Du, Qiang; Feng, Changrui; Ma, Lina; Zhang, Sisi; Wang, Anke; Dong, Lili; Wang, Yan-qing; Liu, Wan; Yan, Xing8; Ling, Yunchao; Zhao, Guoping8; Zhou, Zhihua8; Kang, Wang11,12; Zhang, Tao; Ma, Shuai12,13,14; Yan, Haoteng15,16,17; Liu, Zunpeng13,14,18; Ji, Zejun13,14,18; Cai, Yusheng12,13,14; Wang, Si15,16,17; Song, Moshi12,13,14; Ren, Jie11,13; Zhou, Qi13,14,18,24; Qu, Jing13,14,18; Zhang, Weiqi11,13; Liu, Guanghui12,13,14,15,16,17; Chen, Xu; Chen, Tingting; Sisi, Zhang; Sun, Yanling; Yu, Caixia; Tang, Bixia; Zhu, Junwei; Zhai, Shuang; Sun, Yubin; Chen, Qiancheng; Yang, Xiaoyu; Zhang, Xin30; Sang, Zhengqi; Wang, Yonggang; Zhao, Yilin; Chen, Huanxin; Lan, Li; Wang, Yanqing; Ma, Yingke; Jia, Yaokai; Zheng, Xin-chang; Chen, Meili; Dong, Zou; Zhu, Tongtong; Ming, Chen; Niu, Guangyi; Pan, Rong; Jing, Wei; Sang, Jian; Liu, Chang; Xiong, Yujia19; Lili, Hao; Zhang, Mochen22; Wang, Guoliang; Yi, Lizhi; Wei, Zhao; Zong, Wenting; Wu, Song; Xiong, Zhuang; Rujiao, Li; Zheng, Gong; Li, Rujiao; Liu, Lin; Li, Zhao; Li, Qianpeng; Wei, Jing; Luo, Sicheng20; Wang, Jiajia4,5; Shi, Yirong4,5; Zhou, Honghong4,5; Zhang, Peng4,5; Song, Tingrui4,5; Li, Yanyan4,5; Yang, Fei; Li, Mengwei; Li, Zhao-hua; Kang, Hongen11; Zheng, Xinchang; Li, Ru-jiao; Tian, Dongmei; Liu, Xiaonan; Li, Cuiping; Teng, Xufei; Song, Shuhui; Zhang, Yang; Niu, Guangyi; Zhu, Tongtong; Zhang, Yuansheng; Chen, Ruru20; Zhang, Rongqin; Xu, Feng21; Wang, Yifan; Ling, Yunchao; Zhou, Chenfen; Wang, Haizhou21; Teschendorff, Andrew E.; He, Yungang21; Zhen, Yang21; Li, Cuiping; Zhu, Junwei; Li, Lun; Li, Na; Gong, Zheng; Chen, Meili; Ying Cui; Duan, Guangya; Tong, Jin; Wu, Gangao; Huang, Tianhao; Jin, Enhui; Zhao, Wei; Kang, Hailong; Wang, Zhonghuang; Zeng, Jingyao; Chen, Hua11; Li, Mingkun11; Zhao, Wenming; Ning, Wanshan23; Xue, Yu23; Liu, Yanhu18,24; Cui, Ying; Zhou, Qijun18,24; Liu, Xingyan25; Zhang, Longlong24; Mao, Bingyu24; Zhang, Shihua25; Zhang, Yaping18,24; Wang, Guodong18,24; Zhu, Qianghui18; Li, Xin18; Li, Menghua18,26; Liu, Yuanming27; Luo, Hong27; Wu, Xiaoyuan27; Jing, Haichun27,28 ; Pan, Yitong; Chen, Ming32; Ma, Lina; Shi, Leisheng11; Li, Mingkun11; Lan, Li; Bao, Yiming; Zhao, Wen-ming; Zuo, Zhixiang29; Ren, Jian29; Zhang, Xinxin30; Xiao, Yun30; Li, Xia2,30; Liu, Dan23; Zhang, Chi23; Xue, Yu23; Zhao, Zheng19; Jiang, Tao19; Wu, Wanying31; Zhao, Fangqing31; Meng, Xianwen32; Peng, Di23; Luo, Hao33,34,35,36; Gao, Feng33,34,35,36; Lin, Shaofeng23; Liu, Chuijie23; Guo, Anyuan23; Yuan, Hao; Su, Tianhan; Zhang, Yong E.; Zhou, Yincong32; Zhang, Weizhi23; Fu, Shanshan23; Tan, Xiaodan23; Xie, Yubin29; Guo, Guoji40; Wang, Chenwei23; Liao, Xingyu41,42; Gao, Xin41; Wang, Jianxin42; Xie, Guiyan23; Yuan, Chunhui32; Tian, Feng43,44; Yang, Dechang43,44; Tang, Dachao23; Wu, Wenyi32; Gou, Yujie23; Han, Cheng23; Cui, Qinghua45,46; Li, Xiang Shang; Li, Chuan-Yun; Luo, XiaoTong29; Ren, Jia29; Li, Xia2,30
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| 2022 | |
| Source Publication | NUCLEIC ACIDS RESEARCH
 |
| ISSN | 0305-1048 |
| Volume | 50Issue:D1Pages:D27-D38 |
| Abstract | The National Genomics Data Center (NGDC), part of the China National Center for Bioinformation (CNCB), provides a family of database resources to support global research in both academia and industry. With the explosively accumulated multi-omics data at ever-faster rates, CNCB-NGDC is constantly scaling up and updating its core database resources through big data archive, curation, integration and analysis. In the past year, efforts have been made to synthesize the growing data and knowledge, particularly in single-cell omics and precision medicine research, and a series of resources have been newly developed, updated and enhanced. Moreover, CNCB-NGDC has continued to daily update SARS-CoV-2 genome sequences, variants, haplotypes and literature. Particularly, OpenLB, an open library of bioscience, has been established by providing easy and open access to a substantial number of abstract texts from PubMed, bioRxiv and medRxiv. In addition, Database Commons is significantly updated by cataloguing a full list of global databases, and BLAST tools are newly deployed to provide online sequence search services. |
| Subject Area | Biochemistry & Molecular Biology |
| DOI | 10.1093/nar/gkab951 |
| Indexed By | SCI |
| Language | 英语 |
| WOS Keyword | SEARCH ; GENERATION ; METHBANK ; PLATFORM ; CVTREE |
| WOS Research Area | Science Citation Index Expanded (SCI-EXPANDED) |
| WOS ID | WOS:000743496700004 |
| Publisher | OXFORD UNIV PRESS |
| Subtype | Article |
| Publication Place | OXFORD |
| EISSN | 1362-4962 |
| Funding Organization | Strategic Priority Research Program of the Chinese Academy of Sciences [XDB38030200, XDB38050300, XDB38030400, XDA19050302, XDA19090116, XDA24040201, XDB38030100, XDA12030100, XDB38040300] ; National Key Research and Development Program of China [2019YFA0801801, 2018YFA0801405, 2018YFD1000505, 2018YFC2000100, 2018YFC1406902, 2018YFC0910400, 2018YFC0310602, 2018YFA0903700, 2018YFA0900704, 2017YFC1201200] ; National Natural Science Foundation of China [91731303, 81670462, 31970565, 31871328, 31871294, 31701117, 31970647, 21621004, 31801104, 31771465, 31771410, 31771388, 31671360, 81701567, 31571358, 31525014, 1470330, 31961130380, 31711530221, 31771477, 31571366] ; International Partnership Program of the Chinese Academy of Sciences [153F11KYSB20160008, 153D31KYSB20170121] ; 13th Five-year Informatization Plan of Chinese Academy of Sciences [XXH13505-05] ; Genomics Data Center Construction of Chinese Academy of Sciences [WX145XQ07-04] ; Fundamental Research Funds for the Central Universities [2019kfyRCPY043] ; UK Royal Society-Newton Advanced Fellowship [NAF\R1\191094] ; Key Program of the Chinese Academy of Sciences [KJZD-EW-L14] ; Key Research Program of Frontier Sciences of the Chinese Academy of Sciences [QYZDJ-SSW-SYS009] ; Key Technology Talent Program of the Chinese Academy of Sciences ; 100 Talent Program of the Chinese Academy of Sciences ; K.C. Wong Education Foundation ; Youth Innovation Promotion Association of the Chinese Academy of Sciences [2019104, 2018134, 2017141] ; National Key RD Program [SQ2017YFSF090210] ; China Postdoctoral Science Foundation [2019M652623, 2018M632830] ; China 863 Program [2015AA020108] ; Open Biodiversity and Health Big Data Program of IUBS ; Professional Association of the Alliance of International Science Organizations [ANSO-PA-2020-07] ; Funds for Basic Resources Investigation Research of theMinistry of Science and Technology [2018FY10080002] ; Special Project on National Science and Technology Basic Resources Investigation [2019FY100102] ; CAS Pioneer 100-Talent program ; Key Research Program of the Chinese Academy of Sciences [KFZD-SW-219-5] ; Zhang jiang special project of national innovation demonstration zone [ZJ2018-ZD-013] ; Science and Technology Service Network Initiative of Chinese Academy of Sciences ; Hunan Provincial Science and Technology Program [2018wk4001] ; 111 Project [B18059] ; King Abdullah University of Science and Technology (KAUST) [FCC/1/1976-18-01, FCC/1/1976-23-01, FCC/1/1976-25-01, FCC/1/1976-26-01, REI/1/0018-0101, REI/1/4216-01-01, REI/1/4437-01-01, REI/1/447301-01, URF/1/4352-01-01, URF/1/4379-01-01, REI/1/4742-01-01, URF/1/4098-01-01] ; Chinese Academy of Sciences [KFJ-BRP-017-79] ; The National Key Research and Development Program of China [2017YFC0908403, 2017YFC0907505, 2017YFC0907503, 2017YFC0907502, 2016YFE0206600, 2016YFC0906403, 2016YFC0903003, 2016YFC0901904] ; The National Natural Science Foundation of China [31822030, 31801113, 31801154, 31771458, 91940303, 91940306, 31661143031, 31730110, 31871281, 31970634, 31930021, 32025009, 31970633, 32100520, 62002388, 61772557, 81761168038, 82161148009] ; theNational Key Research and Development Program of China [2016YFC0901903, 2016YFC0901702, 2016YFC0901604, 2017YFC0908405, 2017YFC0908404, 2016YFC0901603, 2016YFB0201702, 2016YFA0501704, 2021YFC0863300, 2016YFC0902500, 2018YFA0900700] |
| Corresponding Author Email | zhangzhang@big.ac.cn ; zhaowm@big.ac.cn ; xiaojingfa@big.ac.cn ; heshunmin@ibp.ac.cn |
| OA | Green Published, gold |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://ir.ibcas.ac.cn/handle/2S10CLM1/28721 |
| Collection | 中科院北方资源植物重点实验室 |
| Affiliation | 1.Chinese Acad Sci, Natl Genom Data Ctr, Beijing Inst Genom, Beijing 100101, Peoples R China 2.Chinese Acad Sci, Beijing Inst Genom, CAS Key Lab Genome Sci & Informat, Beijing 100101, Peoples R China 3.China Natl Ctr Bioinformat, Beijing 100101, Peoples R China 4.Xue, Yongbiao; Bao, Yiming; Zhang Zhang; Zhao, Wenming; Xiao, Jingfa; He, Shun-min; Zhang, Guoqing; Li, Yixue; Guoping, Zhao; Shang, Yun-fei; Mai, Jialin; Shi, Shuo; Lu, Mingming; Zhang, Zhewen; Kang, Hongen; Qian, Qiheng; Zhu, Tong-tong; Shang, Yunfei; Zong, Wenting; Jin, Tong; Zhang, Yuansheng; Zhang, Zhang; Du, Qiang; Feng, Changrui; Kang, Wang; Zhang, Tao; Ma, Shuai; Liu, Zunpeng; Song, Moshi; Ren, Jie; Zhou, Qi; Qu, Jing; Zhang, Weiqi; Liu, Guanghui; Zhu, Tongtong; Ming, Chen; Niu, Guangyi; Pan, Rong; Jing, Wei; Sang, Jian; Liu, Chang; Zhang, Mochen; Wang, Guoliang; Yi, Lizhi; Wei, Zhao; Zong, Wenting; Wu, Song; Xiong, Zhuang; Zheng, Gong; Liu, Lin; Li, Zhao; Li, Qianpeng; Wei, Jing; Luo, Sicheng; Wang, Jiajia; Shi, Yirong; Yang, Fei; Li, Zhao-hua; Kang, Hongen; Liu, Xiaonan; Teng, Xufei; Song, Shuhui; Zhang, Yang; Niu, Guangyi; Zhu, Tongtong; Zhang, Yuansheng; Chen, Ruru; Zhang, Rongqin; Gong, Zheng; Ying Cui; Duan, Guangya; Tong, Jin; Wu, Gangao; Huang, Tianhao; Jin, Enhui; Zhao, Wei; Kang, Hailong... 5.Chinese Acad Sci, Ctr Big Data Res Hlth, Natl Genom Data Ctr, Inst Biophys, Beijing 100101, Peoples R China 6.Chinese Acad Sci, Inst Biophys, Ctr Big Data Res Hlth, Key Lab RNA Biol, Beijing 100101, Peoples R China 7.Zhang, Guoqing; Li, Yixue; Guoping, Zhao; Liu, Wan; Ling, Yunchao; Zhao, Guoping; Wang, Yifan; Ling, Yunchao; Zhou, Chenfen; Teschendorff, Andrew E.] Chinese Acad Sci, Univ Chinese Acad Sci, Natl Genom Data Ctr,Shanghai Inst Nutr & Hlth, Key Lab Computat Biol,CAS MPG Partner Inst Comput, 320 Yueyang Rd, Shanghai 200031, Peoples R China 8.Zhang, Guoqing; Li, Yixue; Guoping, Zhao; Liu, Wan; Ling, Yunchao; Zhao, Guoping; Wang, Yifan; Ling, Yunchao; Zhou, Chenfen; Teschendorff, Andrew E.] Chinese Acad Sci, Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth,Biomed Big Data Ctr, Key Lab Computat Biol,CAS MPG Partner Inst Comput, 320 Yueyang Rd, Shanghai 200031, Peoples R China 9.Chinese Acad Sci, CAS Ctr Excellence Mol Plant Sci, Inst Plant Physiol & Ecol, CAS Key Lab Synthet Biol, 300 Fenglin Rd, Shanghai 200032, Peoples R China 10.Chinese Acad Sci, Ctr Quantitat Synthet Biol, Inst Synthet Biol, Shenzhen Inst Adv Tech Nol, Shenzhen 518000, Peoples R China 11.Guangdong Geneway Decoding Biotech Co Ltd, Foshan 528316, Peoples R China 12.Chinese Acad Sci, Beijing Inst Genom, CAS Key Lab Genom & Precis Med, Beijing 100101, Peoples R China 13.Chinese Acad Sci, Inst Zool, State Key Lab Membrane Biol, Beijing 100101, Peoples R China 14.Chinese Acad Sci, Inst Stem Cell & Regenerat, Beijing 100101, Peoples R China 15.Beijing Inst Stem Cell & Regenerat Med, Beijing 100101, Peoples R China 16.Capital Med Univ, Adv Innovat Ctr Human Brain Protect, Xuanwu Hosp, Beijing 100053, Peoples R China 17.Capital Med Univ, Xuanwu Hosp, Natl Clin Res Ctr Geriatr Disorders, Beijing 100053, Peoples R China 18.Capital Med Univ, Xuanwu Hosp, Aging Translat Med Ctr, Beijing 100053, Peoples R China 19.Chinese Acad Sci, Ctr Excellence Anim Evolut & Genet, Kunming 650223, Yunnan, Peoples R China 20.Capital Med Univ, Beijing Neurosurg Inst, Beijing 100069, Peoples R China 21.Univ Chinese Acad OfSci, Sino Danish Coll, Beijing 100049, Peoples R China 22.Fudan Univ, Shanghai Key Lab Med Epigenet, Int Colab Med Epigenet & Metab, Minist Sci & Technol,Inst Biomed Sci, Shanghai 200032, Peoples R China 23.Univ Chinese Acad Sci, Sch Future Technol, Beijing 100049, Peoples R China 24.Huazhong Univ Sci & Technol, Ctr Artificial Intelligence Biol, Key Lab Mol Biophys,Minist Educ, Hubei Bioinformat & Mol Imaging Key Lab,Coll Life, Wuhan 430074, Hubei, Peoples R China 25.Chinese Acad Sci, Kunming Inst Zool, State Key Lab Genet Resources & Evolut, Kunming 650223, Yunnan, Peoples R China 26.Chinese Acad Sci, Acad Math & Syst Sci, RCSDS, CEMS,NCMIS, Beijing 100190, Peoples R China 27.China Agr Univ, Coll Anim Sci & Technol, Beijing 100193, Peoples R China 28.Chinese Acad Sci, Inst Bot, Key Lab Plant Resources, Beijing 100093, Peoples R China 29.Chinese Acad Sci, Engn Lab Grass Based Livestock Husb, Beijing 100093, Peoples R China 30.Sun Yat Sen Univ, State Key Lab Oncol South China, Canc Ctr, Collaborat Innovat Ctr Canc Med,Sch Life Sci, Guangzhou 510060, Peoples R China 31.Harbin Med Univ, Coll Bioinformat Sci & Technol, Harbin 150081, Heilongjiang, Peoples R China 32.Chinese Acad Sci, Beijing Inst Life Sci, Beijing 100101, Peoples R China 33.Zhejiang Univ, Affiliated Hosp 1, Coll Life Sci, Sch Med,Dept Bioinformat, Hangzhou 310058, Peoples R China 34.Tianjin Univ, Dept Phys, Sch Sci, Tianjin 300072, Peoples R China 35.Tianjin Univ, Frontiers Sci Ctr Synthet Biol, Minist Educ, Tianjin 300072, Peoples R China 36.Tianjin Univ, Minist Educ, Key Lab Syst Bioengn, Tianjin 300072, Peoples R China 37.Collaborat Innovat Ctr Chem Sci & Engn Tianjin, SynBio Res Platform, Tianjin 300072, Peoples R China 38.Yuan, Hao; Su, Tianhan; Zhang, Yong E.] Chinese Acad Sci, Inst Zool, Key Lab Zool Systemat & Evolut, Beijing 100101, Peoples R China 39.Yuan, Hao; Su, Tianhan; Zhang, Yong E.] Chinese Acad Sci, Inst Zool, State Key Lab Integrated Management Pest Insects, Beijing 100101, Peoples R China 40.Zhang, Yong E.] Chinese Acad Sci, CAS Ctr Excellence Anim Evolut & Genet, Kunming 650223, Yunnan, Peoples R China 41.Zhejiang Univ, Ctr Stem Cell & Regenerat Med, Sch Med, Hangzhou 310000, Peoples R China 42.King Abdullah Univ Sci & Technol KAUST, Comp Elect & Math Sci & Engn Div, Computat Biosci Res Ctr CBRC, Thuwal 23955, Saudi Arabia 43.Cent South Univ, Sch Comp Sci & Engn, Hunan Prov Key Lab Bioinformat, Changsha 410083, Peoples R China 44.Peking Univ, Biomed Pioneering Innovat Ctr BIOPIC, Beijing Adv Innovat Ctr Genom ICG, Ctr Bioinformat CBI,Sch Life Sci, Beijing 100871, Peoples R China 45.Peking Univ, Sch Life Sci, State Key Lab Prot & Plant Gene Res, Beijing 100871, Peoples R China 46.Peking Univ, Ctr Noncoding RNA Med, MOE Key Lab Cardiovasc Sci, Dept Biomed Informat,Sch Basic Med Sci, Beijing 100190, Peoples R China 47.Univ Elect Sci & Technol, Ctr Bioinformat, Key Lab NeuroInformat, Minist Educ,Sch Life Sci & Technol, Chengdu 610054, Sichuan, Peoples R China 48.Peking Univ, Coll Future Technol, Inst Mol Med, Beijing Key Lab Cardiometab Mol Med, Beijing 100190, Peoples R China |
| Recommended Citation GB/T 7714 | Xue, Yongbiao,Bao, Yiming,Zhang Zhang,et al. Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022[J]. NUCLEIC ACIDS RESEARCH,2022,50(D1):D27-D38. |
| APA | Xue, Yongbiao.,Bao, Yiming.,Zhang Zhang.,Zhao, Wenming.,Xiao, Jingfa.,...&Li, Xia.(2022).Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022.NUCLEIC ACIDS RESEARCH,50(D1),D27-D38. |
| MLA | Xue, Yongbiao,et al."Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022".NUCLEIC ACIDS RESEARCH 50.D1(2022):D27-D38. |
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| Xue-2022-Database Re（1111KB） | 期刊论文 | 出版稿 | 开放获取 | CC BY-NC-SA | View Application Full Text | |
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