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| Genome-wide signatures of the geographic expansion and breeding of soybean | |
Li, Ying-Hui; Qin, Chao; Wang, Li1; Jiao, Chengzhi2,3; Hong, Huilong; Tian, Yu; Li, Yanfei; Xing, Guangnan4; Wang, Jun5; Gu, Yongzhe; Gao, Xingpeng2; Li, Delin; Li, Hongyu; Liu, Zhangxiong; Jing, Xin2; Feng, Beibei4; Zhao, Tao; Guan, Rongxia; Guo, Yong; Liu, Jun; Yan, Zhe; Zhang, Lijuan; Ge, Tianli; Li, Xiangkong2; Wang, Xiaobo6; Qiu, Hongmei7; Zhang, Wanhai8; Luan, Xiaoyan9; Han, Yingpeng10; Han, Dezhi11; Chang, Ruzhen; Guo, Yalong12 ; Reif, Jochen C.; Jackson, Scott A.; Liu, Bin; Tian, Shilin2,15; Qiu, Li-juan
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| 2023 | |
| 发表期刊 | SCIENCE CHINA-LIFE SCIENCES
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| ISSN | 1674-7305 |
| 卷号 | 66期号:2页码:350-365 |
| 摘要 | Soybean is a leguminous crop that provides oil and protein. Exploring the genomic signatures of soybean evolution is crucial for breeding varieties with improved adaptability to environmental extremes. We analyzed the genome sequences of 2,214 soybeans and proposed a soybean evolutionary route, i.e., the expansion of annual wild soybean (Glycine soja Sieb. & Zucc.) from southern China and its domestication in central China, followed by the expansion and local breeding selection of its landraces (G. max (L.) Merr.). We observed that the genetic introgression in soybean landraces was mostly derived from sympatric rather than allopatric wild populations during the geographic expansion. Soybean expansion and breeding were accompanied by the positive selection of flowering time genes, including GmSPA3c. Our study sheds light on the evolutionary history of soybean and provides valuable genetic resources for its future breeding. |
| 关键词 | soybean adaptation introgression flowering time breeding |
| 学科领域 | Biology |
| DOI | 10.1007/s11427-022-2158-7 |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS关键词 | MAP-BASED CLONING ; POSITIVE SELECTION ; DOMESTICATION ; MATURITY ; GENE ; SEQUENCE ; REVEALS ; SEED ; WILD ; IMPROVEMENT |
| WOS研究方向 | Science Citation Index Expanded (SCI-EXPANDED) |
| WOS记录号 | WOS:000843429600002 |
| 出版者 | SCIENCE PRESS |
| 文献子类 | Article |
| 出版地 | BEIJING |
| EISSN | 1869-1889 |
| 资助机构 | National Key R&D Program of China [2021YFD1201601, 2016YFD0100201, 2020YFE0202300] ; National Natural Science Foundation of China [32072091] ; Platform of National Crop Germplasm Resources of China [2016-004, 2017-004, 2018-004, 2019-04, 2020-05] ; Agricultural Science and Technology Innovation Program (ASTIP) of Chinese Academy of Agricultural Sciences [CAAS-ZDRW202109] ; Crop Germplasm Resources Protection [2016NWB036-05, 2017NWB036-05, 2018NWB036-05, 2019NWB036-05] |
| 作者邮箱 | sjackson@uga.edu ; liubin05@caas.cn ; tianshilin@novogene.com ; qiulijuan@caas.cn |
| 引用统计 | |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.ibcas.ac.cn/handle/2S10CLM1/29100 |
| 专题 | 系统与进化植物学国家重点实验室 |
| 作者单位 | 1.Chinese Acad Agr Sci, Inst Crop Sci,Key Lab Soybean Biol Beijing MOA, Natl Key Facil Crop Gene Resources & Genet Improv, Key Lab Crop Gene Resource & Germplasm Enhancemen, Beijing 100081, Peoples R China 2.Chinese Acad Agr Sci, Guangdong Lab Lingnan Modern Agr, Agr Genom Inst Shenzhen, Genome Anal Lab,Minist Agr,Shenzhen Branch, Shenzhen 518000, Peoples R China 3.Novogene Bioinformat Inst, Beijing 100098, Peoples R China 4.Nanjing Agr Univ, State Key Lab Crop Genet & Germplasm Enhancement, Cytogenet Inst, Nanjing 210095, Peoples R China 5.Nanjing Agr Univ, Soybean Res Inst,State Key Lab Crop Genet & Germp, MOA Natl Ctr Soybean Improvement, MOA Key Lab Biol & Genet Improvement Soybean Gen, Nanjing 210095, Peoples R China 6.Yangtze Univ, Coll Agr, Jingzhou 451199, Peoples R China 7.Anhui Agr Univ, Sch Agron, Hefei 230036, Peoples R China 8.Jilin Acad Agr Sci, Changchun 130119, Peoples R China 9.Hulun Buir Inst Agr Sci, Hulun Buir 021008, Peoples R China 10.Heilongjiang Acad Agr Sci, Soybean Res Inst, Harbin 150086, Peoples R China 11.Northeast Agr Univ, Key Lab Soybean Biol, Chinese Minist Educ,Chinese Agr Minist, Key Lab Soybean Biol & Breeding Genet, Harbin 150030, Peoples R China 12.Heilongjiang Acad Agr Sci, Heihe Branch, Harbin 150086, Peoples R China 13.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing 100093, Peoples R China 14.Reif, Jochen C.] Leibniz Inst Plant Genet & Crop Plant Res IPK, Dept Breeding Res, D-06466 Gatersleben, Germany 15.Jackson, Scott A.] Univ Georgia, Ctr Appl Genet Technol, Athens, GA 30602 USA 16.Wuhan Univ, Coll Life Sci, Tibetan Ctr Ecol & Conservat WHU TU, Hubei Key Lab Cell Homeostasis,Dept Ecol, Wuhan 430072, Peoples R China |
| 推荐引用方式 GB/T 7714 | Li, Ying-Hui,Qin, Chao,Wang, Li,et al. Genome-wide signatures of the geographic expansion and breeding of soybean[J]. SCIENCE CHINA-LIFE SCIENCES,2023,66(2):350-365. |
| APA | Li, Ying-Hui.,Qin, Chao.,Wang, Li.,Jiao, Chengzhi.,Hong, Huilong.,...&Qiu, Li-juan.(2023).Genome-wide signatures of the geographic expansion and breeding of soybean.SCIENCE CHINA-LIFE SCIENCES,66(2),350-365. |
| MLA | Li, Ying-Hui,et al."Genome-wide signatures of the geographic expansion and breeding of soybean".SCIENCE CHINA-LIFE SCIENCES 66.2(2023):350-365. |
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| Li-2023-Genome-wide （2524KB） | 期刊论文 | 出版稿 | 开放获取 | CC BY-NC-SA | 浏览 请求全文 | |
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