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Regulatory network of fruit ripening: current understanding and future challenges 期刊论文
NEW PHYTOLOGIST, 2020, 卷号: 228, 期号: 4, 页码: 1219-1226
Authors:  Chen, Tong;  Qin, Guozheng;  Tian, Shiping
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epigenetic regulation  fruit ripening  hormone  regulatory network  transcription factor  
Gene body demethylation increases expression and is associated with self-pruning during grape genome duplication 期刊论文
HORTICULTURE RESEARCH, 2020, 卷号: 7, 期号: 1
Authors:  Zou, Luming;  Liu, Wenwen;  Zhang, Zhan;  Edwards, Everard J.;  Gathunga, Elias Kirabi;  Fan, Peige;  Duan, Wei;  Li, Shaohua;  Liang, Zhenchang
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Evolutionary and functional genomics of DNA methylation in maize domestication and improvement 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1
Authors:  Xu, Gen;  Lyu, Jing;  Li, Qing;  Liu, Han;  Wang, Dafang;  Zhang, Mei;  Springer, Nathan M.;  Ross-Ibarra, Jeffrey;  Yang, Jinliang
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The Pattern and Function of DNA Methylation in Fungal Plant Pathogens 期刊论文
MICROORGANISMS, 2020, 卷号: 8, 期号: 2
Authors:  He, Chang;  Zhang, Zhanquan;  Li, Boqiang;  Tian, Shiping
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DNA methylation  fungal plant pathogen  development  pathogenicity  
A Rice NBS-ARC Gene Conferring Quantitative Resistance to Bacterial Blight Is Regulated by a Pathogen Effector-Inducible miRNA 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 12, 页码: 1752-1767
Authors:  Jiang, Guanghuai;  Liu, Dongfeng;  Yin, Dedong;  Zhou, Zhuangzhi;  Shi, Yue;  Li, Chunrong;  Zhu, Lihuang;  Zhai, Wenxue
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quantitative trait locus  disease resistance  bacterial blight  NB-ARC  microRNA  DNA methylation  
The Circadian Clock Gene, TaPRR1, Is Associated With Yield-Related Traits in Wheat (Triticum aestivum L.) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2020, 卷号: 11
Authors:  Sun, Han;  Zhang, Wenping;  Wu, Yongzhen;  Gao, Lifeng;  Cui, Fa;  Zhao, Chunhua;  Guo, Zhiai;  Jia, Jizeng
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TaPRR1  haplotype  circadian rhythm  association analysis  yield-related traits  genetic differentiation  
A role of age-dependent DNA methylation reprogramming in regulating the regeneration capacity of Boea hygrometrica leaves 期刊论文
FUNCTIONAL & INTEGRATIVE GENOMICS, 2020, 卷号: 20, 期号: 1, 页码: 133-149
Authors:  Sun, Run-Ze;  Zuo, En-Hui;  Qi, Jin-Feng;  Liu, Yang;  Lin, Chih-Ta;  Deng, Xin
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Shoot regeneration  Donor plant age  DNA methylome  Transcriptome  Resurrection plant  Boea hygrometrica  
Arabidopsis histone H3K4 demethylase JMJ17 functions in dehydration stress response 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 223, 期号: 3, 页码: 1372-1387
Authors:  Huang, Shuangzhan;  Zhang, Ai;  Jin, Jing Bo;  Zhao, Bo;  Wang, Tian-Jing;  Wu, Yifan;  Wang, Shuang;  Liu, Yutong;  Wang, Jie;  Guo, Peng;  Ahmad, Rafiq;  Liu, Bao;  Xu, Zheng-Yi
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abiotic stress  abscisic acid (ABA)  Arabidopsis thaliana  dehydration stress  histone demethylation  transcriptional regulation  
RNA methylomes reveal the m(6)A-mediated regulation of DNA demethylase gene SlDML2 in tomato fruit ripening 期刊论文
GENOME BIOLOGY, 2019, 卷号: 20, 期号: 1
Authors:  Zhou, Leilei;  Tian, Shiping;  Qin, Guozheng
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Fruit ripening  DNA methylation  mRNA m(6)A methylation  m(6)A RNA methylome  RNA demethylase SlALKBH2  DNA demethylase SlDML2  Colorless non-ripening  Tomato  
The developmental dynamics of the Populus stem transcriptome 期刊论文
PLANT BIOTECHNOLOGY JOURNAL, 2019, 卷号: 17, 期号: 1, 页码: 206-219
Authors:  Chao, Qing;  Gao, Zhi-Fang;  Zhang, Dong;  Zhao, Biligen-Gaowa;  Dong, Feng-Qin;  Fu, Chun-Xiang;  Liu, Li-Jun;  Wang, Bai-Chen
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PacBio Iso-Seq  stem cell maintenance  primary growth  secondary growth  transcription factor