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Paleo-polyploidization in Lycophytes 期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 卷号: 18, 期号: 3, 页码: 333-340
Authors:  Wang, Jinpeng;  Yu, Jigao;  Sun, Pengchuan;  Li, Chao;  Song, Xiaoming;  Lei, Tianyu;  Li, Yuxian;  Yuan, Jiaqing;  Sun, Sangrong;  Ding, Hongling;  Duan, Xueqian;  Shen, Shaoqi;  Shen, Yanshuang;  Li, Jing;  Meng, Fanbo;  Xie, Yangqin;  Wang, Jianyu;  Hou, Yue;  Zhang, Jin;  Zhang, Xianchun;  Li, Xiu-Qing;  Paterson, Andrew H.;  Wang, Xiyin
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Vascular plant  Lycophytes  Genome  Polyploidy  Evolution  
Evolutionary strategies drive a balance of the interacting gene products for the CBL and CIPK gene families 期刊论文
NEW PHYTOLOGIST, 2020, 卷号: 226, 期号: 5, 页码: 1506-1516
Authors:  Zhang, Xiaoxia;  Li, Xiaoxia;  Zhao, Ran;  Zhou, Yun;  Jiao, Yuannian
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calcineurin B-like (CBL)  CBL-interacting protein kinase (CIPK)  gene balance hypothesis (GBH)  gene retention  whole-genome duplication (WGD)  
The origin of allotetraploid Lepisorus inaequibasis (Polypodiaceae) and paternal bias in its morphology and abiotic niche 期刊论文
TAXON, 2020, 卷号: 69, 期号: 1, 页码: 43-55
Authors:  Zhao, Cun-Feng;  Wei, Ran;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
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hybrid origin  paternal preference  polyploid  reticulate evolution  
Gene body demethylation increases expression and is associated with self-pruning during grape genome duplication 期刊论文
HORTICULTURE RESEARCH, 2020, 卷号: 7, 期号: 1
Authors:  Zou, Luming;  Liu, Wenwen;  Zhang, Zhan;  Edwards, Everard J.;  Gathunga, Elias Kirabi;  Fan, Peige;  Duan, Wei;  Li, Shaohua;  Liang, Zhenchang
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Chromosome-level genome assembly of a parent species of widely cultivated azaleas 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1
Authors:  Yang, Fu-Sheng;  Nie, Shuai;  Liu, Hui;  Shi, Tian-Le;  Tian, Xue-Chan;  Zhou, Shan-Shan;  Bao, Yu-Tao;  Jia, Kai-Hua;  Guo, Jing-Fang;  Zhao, Wei;  An, Na;  Zhang, Ren-Gang;  Yun, Quan-Zheng;  Wang, Xin-Zhu;  Mannapperuma, Chanaka;  Porth, Ilga;  El-Kassaby, Yousry Aly;  Street, Nathaniel Robert;  Wang, Xiao-Ru;  Van de Peer, Yves;  Mao, Jian-Feng
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Sequential Paleotetraploidization shaped the carrot genome 期刊论文
BMC PLANT BIOLOGY, 2020, 卷号: 20, 期号: 1
Authors:  Wang, Jinpeng;  Yu, Jigao;  Li, Yuxian;  Wei, Chendan;  Guo, He;  Liu, Ying;  Zhang, Jin;  Li, Xiuqing;  Wang, Xiyin
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Carrot  Coffee  Lettuce  Carotenoids  Gene collinearity  Genomic fractionation  Polyploidization  
A Collinearity-Incorporating Homology Inference Strategy for Connecting Emerging Assemblies in the Triticeae Tribe as a Pilot Practice in the Plant Pangenomic Era 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 12, 页码: 1694-1708
Authors:  Chen, Yongming;  Song, Wanjun;  Xie, Xiaoming;  Wang, Zihao;  Guan, Panfeng;  Peng, Huiru;  Jiao, Yuannian;  Ni, Zhongfu;  Sun, Qixin;  Guo, Weilong
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homology inference  collinearity  database  pangenome  Triticeae tribe  polyploid  
The ancient wave of polyploidization events in flowering plants and their facilitated adaptation to environmental stress 期刊论文
PLANT CELL AND ENVIRONMENT, 2020, 卷号: 43, 期号: 12, 页码: 2847-2856
Authors:  Zhang, Liangsheng;  Wu, Shengdan;  Chang, Xiaojun;  Wang, Xiuyun;  Zhao, Yunpeng;  Xia, Yiping;  Trigiano, Robert N.;  Jiao, Yuannian;  Chen, Fei
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angiosperms  gene duplication  polyploidy  Nymphaeales  
Genetic Contribution of Paleopolyploidy to Adaptive Evolution in Angiosperms 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 1, 页码: 59-71
Authors:  Wu, Shengdan;  Han, Baocai;  Jiao, Yuannian
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whole-genome duplication  paleopolyploidy  adaptive evolution  phylogenomic  Cretaceous-Paleocene boundary  gene regulatory network  
Polyploidy Index and Its Implications for the Evolution of Polyploids 期刊论文
FRONTIERS IN GENETICS, 2019, 卷号: 10
Authors:  Wang, Jinpeng;  Qin, Jun;  Sun, Pengchuan;  Ma, Xuelian;  Yu, Jigao;  Li, Yuxian;  Sun, Sangrong;  Lei, Tianyu;  Meng, Fanbo;  Wei, Chendan;  Liu, Xinyu;  Guo, He;  Liu, Xiaojian;  Xia, Ruiyan;  Li Wang;  Ge, Weina;  Song, Xiaoming;  Zhang, Lan;  Guo, Di;  Wang, Jinyu;  Baol, Shoutong;  Jiang, Shan;  Feng, Yishan;  Li, Xueping;  Paterson, Andrew H.;  Wang, Xiyin
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polyploidy  angiosperm  P-index  genomics  bioinformatics