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Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Synthesis of Nuclear and Chloroplast Data Combined With Network Analyses Supports the Polyploid Origin of the Apple Tribe and the Hybrid Origin of the Maleae-Gillenieae Clade 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12
作者:  Hodel, Richard G. J.;  Zimmer, Elizabeth A.;  Liu, Bin-Bin;  Wen, Jun
Adobe PDF(3910Kb)  |  收藏  |  浏览/下载：5/0  |  提交时间：2024/03/07
allopolyploidy  ancient hybridization  cytonuclear conflict  genome doubling  phylogenetic networks  phylogenomics  reticulate evolution  
Phylogenomic analyses based on the plastid genome and concatenated nrDNA sequence data reveal cytonuclear discordance in genus Atractylodes (Asteraceae: Carduoideae) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13
作者:  Liu, Jinxin;  Shi, Mengmeng;  Zhang, Zhaolei;  Xie, Hongbo;  Kong, Weijun;  Wang, Qiuling;  Zhao, Xinlei;  Zhao, Chunying;  Lin, Yulin;  Zhang, Xiaoxia;  Shi, Linchun
Adobe PDF(7443Kb)  |  收藏  |  浏览/下载：7/0  |  提交时间：2024/03/07
Atractylodes  plastid genome  nrDNA concatenated sequence  phylogeny  cyto-nuclear discordance  
Can plastid genome sequencing be used for species identification in Lauraceae? 期刊论文
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2021, 卷号: 197, 期号: 1, 页码: 1-14
作者:  Liu, Zhi-Fang;  Ma, Hui;  Ci, Xiu-Qin;  Li, Lang;  Song, Yu;  Liu, Bing;  Li, Hsi-Wen;  Wang, Shu-Li;  Qu, Xiao-Jian;  Hu, Jian-Lin;  Zhang, Xiao-Yan;  Conran, John G.;  Twyford, Alex D.;  Yang, Jun-Bo;  Hollingsworth, Peter M.;  Li, Jie
Adobe PDF(2547Kb)  |  收藏  |  浏览/下载：76/0  |  提交时间：2023/02/24
cytonuclear discordance  DNA barcoding  nrDNA  phylogenetics  plastomes