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Integrated phylogenomic analyses unveil reticulate evolution in Parthenocissus (Vitaceae), highlighting speciation dynamics in the Himalayan-Hengduan Mountains 期刊论文
NEW PHYTOLOGIST, 2023, 卷号: 238, 期号: 2, 页码: 888-903
作者:  Yu, Jinren;  Niu, Yanting;  You, Yichen;  Cox, Cymon J.;  Barrett, Russell L.;  Trias-Blasi, Anna;  Guo, Jing;  Wen, Jun;  Lu, Limin;  Chen, Zhiduan
Adobe PDF(4450Kb)  |  收藏  |  浏览/下载：23/0  |  提交时间：2024/03/07
biogeography  comprehensive approach  Himalayan-Hengduan Mountains region  Parthenocissus  phylogenetic discordance  reticulation  speciation reversal  
Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023, 卷号: 61, 期号: 1, 页码: 22-41
作者:  Duan, Lei;  Han, Li-Na;  Liu, Bin-Bin;  Leostrin, Artem;  Harris, A. J.;  Wang, Lin;  Arslan, Emine;  Ertugrul, Kuddisi;  Knyazev, Mikhail;  Hantemirova, Elena;  Wen, Jun;  Chen, Hong-Feng
Adobe PDF(1597Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
character evolution  Glycyrrhiza  machine learning analysis  medicinal group  phylogenomics  species delimitation  
Characterization of a novel arsenite long-distance transporter from arsenic hyperaccumulator fern Pteris vittata 期刊论文
NEW PHYTOLOGIST, 2022, 卷号: 233, 期号: 6, 页码: 2488-2502
作者:  Yan, Huili;  Xu, Wenxiu;  Zhang, Tian;  Feng, Lu;  Liu, Ruoxi;  Wang, Luyao;  Wu, Lulu;  Zhang, Han;  Zhang, Xiaohan;  Li, Ting;  Peng, Zhimei;  Jin, Chen;  Yu, Yijun;  Ping, Junai;  Ma, Mi;  He, Zhenyan
Adobe PDF(2791Kb)  |  收藏  |  浏览/下载：8/0  |  提交时间：2024/03/07
AsIII efflux  long-distance translocation  Pteris vittata  PvAsE1  SLC13-like protein  
Genomes shed light on the evolution of Begonia, a mega-diverse genus 期刊论文
NEW PHYTOLOGIST, 2022, 卷号: 234, 期号: 1, 页码: 295-310
作者:  Li, Lingfei;  Chen, Xiaoli;  Fang, Dongming;  Dong, Shanshan;  Guo, Xing;  Li, Na;  Campos-Dominguez, Lucia;  Wang, Wenguang;  Liu, Yang;  Lang, Xiaoan;  Peng, Yang;  Tian, Daike;  Thomas, Daniel C.;  Mu, Weixue;  Liu, Min;  Wu, Chenyu;  Yang, Ting;  Zhang, Suzhou;  Yang, Leilei;  Yang, Jianfen;  Liu, Zhong-Jian;  Zhang, Liangsheng;  Zhang, Xingtan;  Chen, Fei;  Jiao, Yuannian;  Guo, Yalong;  Hughes, Mark;  Wang, Wei;  Liu, Xiaofei;  Zhong, Chunmei;  Li, Airong;  Sahu, Sunil Kumar;  Yang, Huanming;  Wu, Ernest;  Sharbrough, Joel;  Lisby, Michael;  Liu, Xin;  Xu, Xun;  Soltis, Douglas E.;  Van de Peer, Yves;  Kidner, Catherine;  Zhang, Shouzhou;  Liu, Huan
Adobe PDF(3399Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Begonia  evolution  genomes  introgression  shade adaptation  whole-genome duplication  
A chromosome-scale genome and transcriptomic analysis of the endangered tropical tree Vatica mangachapoi (Dipterocarpaceae) 期刊论文
DNA RESEARCH, 2022, 卷号: 29, 期号: 2
作者:  Tang, Liang;  Liao, Xuezhu;  Tembrock, Luke R.;  Ge, Song;  Wu, Zhiqiang
Adobe PDF(910Kb)  |  收藏  |  浏览/下载：9/0  |  提交时间：2024/03/07
dipterocarp forests  genome assembly  whole-genome duplication  tree genomics  conservation biology  
Phylogeny and evolution of Cupressaceae: Updates on intergeneric relationships and new insights on ancient intergeneric hybridization 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 177
作者:  Liu, Xin-Quan;  Xia, Xiao-Mei;  Chen, Luo;  Wang, Xiao-Quan
Adobe PDF(4155Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
Phylogenomics  Biogeography  Reticulate evolution  Ancient hybridization  Cupressaceae  Conifer  
Recent advances on phylogenomics of gymnosperms and a new classification 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 4, 页码: 340-350
作者:  Yang, Yong;  Ferguson, David Kay;  Liu, Bing;  Mao, Kang-Shan;  Gao, Lian-Ming;  Zhang, Shou-Zhou;  Wan, Tao;  Rushforth, Keith;  Zhang, Zhi-Xiang
Adobe PDF(2502Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
Classi fication  Gymnosperms  Morphology  New tribe  Phylogenomics  Taxonomy  
Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 4, 页码: 773-788
作者:  Xue, Jia-Yu;  Dong, Shan-Shan;  Wang, Ming-Qiang;  Song, Tian-Qiang;  Zhou, Guang-Can;  Li, Zhen;  Van de Peer, Yves;  Shao, Zhu-Qing;  Wang, Wei;  Chen, Min;  Zhang, Yan-Mei;  Sun, Xiao-Qin;  Chen, Hong-Feng;  Zhang, Yong-Xia;  Zhang, Shou-Zhou;  Chen, Fei;  Zhang, Liang-Sheng;  Cox, Cymon;  Liu, Yang;  Wang, Qiang;  Hang, Yue-Yu
Adobe PDF(1723Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
early angiosperm radiation  incongruence  mitochondrial genome  phylogenomics  systematic error  
Phylogenomic Analysis Reconstructed the Order Matoniales from Paleopolyploidy Veil 期刊论文
PLANTS-BASEL, 2022, 卷号: 11, 期号: 12
作者:  Shu, Jiang-Ping;  Wang, Hao;  Shen, Hui;  Wang, Rui-Jiang;  Fu, Qiang;  Wang, Yong-Dong;  Jiao, Yuan-Nian;  Yan, Yue-Hong
Adobe PDF(4622Kb)  |  收藏  |  浏览/下载：8/0  |  提交时间：2024/03/07
ancient polyploidization  ancient radiation  reticulate evolution  mass extinction  ferns  phylogeny  1-to-1 orthologous genes  
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes