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Improved pea reference genome and pan-genome highlight genomic features and evolutionary characteristics 期刊论文
NATURE GENETICS, 2022, 卷号: 54, 期号: 10, 页码: 1553+
作者:  Yang, Tao;  Liu, Rong;  Luo, Yingfeng;  Hu, Songnian;  Wang, Dong;  Wang, Chenyu;  Pandey, Manish K.;  Ge, Song;  Xu, Quanle;  Li, Nana;  Li, Guan;  Huang, Yuning;  Saxena, Rachit K.;  Ji, Yishan;  Li, Mengwei;  Yan, Xin;  He, Yuhua;  Liu, Yujiao;  Wang, Xuejun;  Xiang, Chao;  Varshney, Rajeev K.;  Ding, Hanfeng;  Gao, Shenghan;  Zong, Xuxiao
Adobe PDF(5518Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Stepwise selection of natural variations at CTB2 and CTB4a improves cold adaptation during domestication of japonica rice 期刊论文
NEW PHYTOLOGIST, 2021, 卷号: 231, 期号: 3, 页码: 1056-1072
作者:  Li, Jilong;  Zeng, Yawen;  Pan, Yinghua;  Zhou, Lei;  Zhang, Zhanying;  Guo, Haifeng;  Lou, Qijin;  Shui, Guanghou;  Huang, Hanguang;  Tian, He;  Guo, Yongmei;  Yuan, Pingrong;  Yang, Hong;  Pan, Guojun;  Wang, Ruiying;  Zhang, Hongliang;  Yang, Shuhua;  Guo, Yan;  Ge, Song;  Li, Jinjie;  Li, Zichao
Adobe PDF(2933Kb)  |  收藏  |  浏览/下载：76/0  |  提交时间：2023/02/24
cold adaptation  de novo mutation  rice  standing variation  stepwise selection  
Identification of long noncoding natural antisense transcripts (lncNATs) correlated with drought stress response in wild rice (Oryza nivara) 期刊论文
BMC GENOMICS, 2021, 卷号: 22, 期号: 1
作者:  Xu, Yong-Chao;  Zhang, Jie;  Zhang, Dong-Yan;  Nan, Ying-Hui;  Ge, Song;  Guo, Ya-Long
Adobe PDF(3950Kb)  |  收藏  |  浏览/下载：67/0  |  提交时间：2023/02/24
Drought stress  Long noncoding RNA  O  nivara  Strand-specific RNA-seq  Wild rice  
Divergence in flowering time is a major component contributing to reproductive isolation between two wild rice species (Oryza rufipogon and O. nivara) 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 卷号: 63, 期号: 11, 页码: 1714-1724
作者:  Xu, Xun;  Meng, Qing-Lin;  Geng, Mu-Fan;  Ren, Ning-Ning;  Zhou, Lian;  Du, Yu-Su;  Cai, Zhe;  Wang, Mei-Xia;  Wang, Xin;  Wang, Xiu-Hua;  Han, Jing-Dan;  Jiang, Shuai;  Jing, Chun-Yan;  Liu, Rong;  Zheng, Xiao-Ming;  Yang, Qing-Wen;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(899Kb)  |  收藏  |  浏览/下载：119/0  |  提交时间：2022/03/01
reproductive isolation  flowering time  speciation  adaptation  Oryza species  
Decrease of gene expression diversity during domestication of animals and plants 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2019, 卷号: 19
作者:  Liu, Wei;  Chen, Lei;  Zhang, Shilai;  Hu, Fengyi;  Wang, Zheng;  Lyu, Jun;  Wang, Bao;  Xiang, Hui;  Zhao, Ruoping;  Tian, Zhixi;  Ge, Song;  Wang, Wen
Adobe PDF(845Kb)  |  收藏  |  浏览/下载：87/0  |  提交时间：2022/01/06
Domestication  Decrease  Gene expression diversity  
Natural Variation in the Promoter of GSE5 Contributes to Grain Size Diversity in Rice 期刊论文
MOLECULAR PLANT, 2017, 卷号: 10, 期号: 5, 页码: 685-694
作者:  Duan, Penggen;  Xu, Jinsong;  Zeng, Dali;  Zhang, Baolan;  Geng, Mufan;  Zhang, Guozheng;  Huang, Ke;  Huang, Luojiang;  Xu, Ran;  Ge, Song;  Qian, Qian;  Li, Yunhai
Adobe PDF(929Kb)  |  收藏  |  浏览/下载：85/0  |  提交时间：2022/03/28
rice  natural variation  GSE5  grain size  cell proliferation  
Genomic variation associated with local adaptation of weedy rice during de-domestication 期刊论文
NATURE COMMUNICATIONS, 2017, 卷号: 8
作者:  Qiu, Jie;  Zhou, Yongjun;  Mao, Lingfeng;  Ye, Chuyu;  Wang, Weidi;  Zhang, Jianping;  Yu, Yongyi;  Fu, Fei;  Wang, Yunfei;  Qian, Feijian;  Qi, Ting;  Wu, Sanling;  Sultana, Most Humaira;  Cao, Ya-Nan;  Wang, Yu;  Timko, Michael P.;  Ge, Song;  Fan, Longjiang;  Lu, Yongliang
Adobe PDF(551Kb)  |  收藏  |  浏览/下载：107/0  |  提交时间：2022/03/28
COLD1 Confers Chilling Tolerance in Rice 期刊论文
CELL, 2015, 卷号: 160, 期号: 6, 页码: 1209-1221
作者:  Ma, Yun;  Dai, Xiaoyan;  Xu, Yunyuan;  Luo, Wei;  Zheng, Xiaoming;  Zeng, Dali;  Pan, Yajun;  Lin, Xiaoli;  Liu, Huanhuan;  Zhang, Dajian;  Xiao, Jun;  Guo, Xiaoyu;  Xu, Shujuan;  Niu, Yuda;  Jin, Jingbo;  Zhang, Hui;  Xu, Xun;  Li, Legong;  Wang, Wen;  Qian, Qian;  Ge, Song;  Chong, Kang
Adobe PDF(4003Kb)  |  收藏  |  浏览/下载：249/0  |  提交时间：2022/09/13
Multiple species of wild tree peonies gave rise to the 'king of flowers', Paeonia suffruticosa Andrews 期刊论文
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2014, 卷号: 281, 期号: 1797
作者:  Zhou, Shi-Liang;  Zou, Xin-Hui;  Zhou, Zhi-Qin;  Liu, Jing;  Xu, Chao;  Yu, Jing;  Wang, Qiang;  Zhang, Da-Ming;  Wang, Xiao-Quan;  Ge, Song;  Sang, Tao;  Pan, Kai-Yu;  Hong, De-Yuan
Adobe PDF(730Kb)  |  收藏  |  浏览/下载：38/0  |  提交时间：2023/03/30
conservation  hybridization  Paeonia  RNA-seq  species tree  
Association of functional nucleotide polymorphisms at DTH2 with the northward expansion of rice cultivation in Asia 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 卷号: 110, 期号: 8, 页码: 2775-2780
作者:  Wu, Weixun;  Zheng, Xiao-Ming;  Lu, Guangwen;  Zhong, Zhengzheng;  Gao, He;  Chen, Liping;  Wu, Chuanyin;  Wang, Hong-Jun;  Wang, Qi;  Zhou, Kunneng;  Wang, Jiu-Lin;  Wu, Fuqing;  Zhang, Xin;  Guo, Xiuping;  Cheng, Zhijun;  Lei, Cailin;  Lin, Qibing;  Jiang, Ling;  Wang, Haiyang;  Ge, Song;  Wan, Jianmin
Adobe PDF(803Kb)  |  收藏  |  浏览/下载：49/0  |  提交时间：2023/04/25