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Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023, 卷号: 61, 期号: 1, 页码: 22-41
作者:  Duan, Lei;  Han, Li-Na;  Liu, Bin-Bin;  Leostrin, Artem;  Harris, A. J.;  Wang, Lin;  Arslan, Emine;  Ertugrul, Kuddisi;  Knyazev, Mikhail;  Hantemirova, Elena;  Wen, Jun;  Chen, Hong-Feng
Adobe PDF(1597Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
character evolution  Glycyrrhiza  machine learning analysis  medicinal group  phylogenomics  species delimitation  
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1
作者:  Dong, Wenpan;  Li, Enze;  Liu, Yanlei;  Xu, Chao;  Wang, Yushuang;  Liu, Kangjia;  Cui, Xingyong;  Sun, Jiahui;  Suo, Zhili;  Zhang, Zhixiang;  Wen, Jun;  Zhou, Shiliang
Adobe PDF(4457Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Ancient introgression  Gene tree conflict  Incomplete lineage sorting  Oleaceae  Phylogenomics  Rate heterogeneity  
The genome of Dioscorea zingiberensis sheds light on the biosynthesis, origin and evolution of the medicinally important diosgenin saponins 期刊论文
HORTICULTURE RESEARCH, 2022, 卷号: 9
作者:  Li, Yi;  Tan, Chao;  Li, Zihao;  Guo, Jingzhe;  Li, Song;  Chen, Xin;  Wang, Chen;  Dai, Xiaokang;  Yang, Huan;  Song, Wei;  Hou, Lixiu;  Xu, Jiali;  Tong, Ziyu;  Xu, Anran;  Yuan, Xincheng;  Wang, Weipeng;  Yang, Qingyong;  Chen, Lingling;  Sun, Zongyi;  Wang, Kai;  Pan, Bo;  Chen, Jianghua;  Bao, Yinghua;  Liu, Faguang;  Qi, Xiaoquan;  Gang, David R.;  Wen, Jun;  Li, Jiaru
Adobe PDF(3568Kb)  |  收藏  |  浏览/下载：10/0  |  提交时间：2024/03/07
Historical biogeography of Tetrastigma (Vitaceae): Insights into floristic exchange patterns between Asia and Australia 期刊论文
CLADISTICS, 2021, 卷号: 37, 期号: 6, 页码: 803-815
作者:  Peng, Dan-Xiao;  Dang, Viet-Cuong;  Habib, Sadaf;  Barrett, Russell L.;  Trias-Blasi, Anna;  Wen, Jun;  Chen, Zhi-Duan;  Lu, Li-Min
Adobe PDF(4590Kb)  |  收藏  |  浏览/下载：74/0  |  提交时间：2023/02/24
On the Species Delimitation of the Maddenia Group of Prunus (Rosaceae): Evidence From Plastome and Nuclear Sequences and Morphology 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12
作者:  Su, Na;  Liu, Bin-bin;  Wang, Jun-ru;  Tong, Ru-chang;  Ren, Chen;  Chang, Zhao-yang;  Zhao, Liang;  Potter, Daniel;  Wen, Jun
Adobe PDF(6786Kb)  |  收藏  |  浏览/下载：77/0  |  提交时间：2023/02/24
Maddenia  Prunus  Rosaceae  barcoding  chloroplast genome  single-copy nuclear genes  species delimitation  
Rehmannieae or Rehmanniaceae? Evidence from plastome sequences and floral morphology 期刊论文
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2021, 卷号: 196, 期号: 2, 页码: 145-162
作者:  Xia, Zhi;  Li, Cui-Cui;  Wen, Jun;  Wang, Yin-Zheng
Adobe PDF(4375Kb)  |  收藏  |  浏览/下载：66/0  |  提交时间：2023/02/24
floral development  Lamiales  Orobanchaceae  plastid genome  Rehmannia  Triaenophora  
An updated phylogenetic and biogeographic analysis based on genome skimming data reveals convergent evolution of shrubby habit in Clematis in the Pliocene and Pleistocene 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2021, 卷号: 164
作者:  He, Jian;  Lyu, Rudan;  Luo, Yike;  Lin, Lele;  Yao, Min;  Xiao, Jiamin;  Xie, Lei;  Wen, Jun;  Pei, Linying;  Yan, Shuangxi;  Cheng, Jin;  Li, Jinyu;  Li, Liangqian
Adobe PDF(9248Kb)  |  收藏  |  浏览/下载：83/0  |  提交时间：2023/02/24
Clematissect  Fruticella  Convergent evolution  Genome skimming  nrDNA  Plastid genome  Phylogeny  
Nuclear and Chloroplast Sequences Resolve the Enigmatic Origin of the Concord Grape 期刊论文
FRONTIERS IN PLANT SCIENCE, 2020, 卷号: 11
作者:  Wen, Jun;  Herron, Sterling A.;  Yang, Xue;  Liu, Bin-Bin;  Zuo, Yun-Juan;  Harris, A. J.;  Kalburgi, Yash;  Johnson, Gabriel;  Zimmer, Elizabeth A.
Adobe PDF(5969Kb)  |  收藏  |  浏览/下载：88/0  |  提交时间：2022/03/01
Concord grape  grape  origin  Vitis  Vitaceae  
Taxonomy and biogeography ofDiapensia(Diapensiaceae) based on chloroplast genome data 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020, 卷号: 58, 期号: 5, 页码: 696-709
作者:  Ye, Jian-Fei;  Niu, Yan-Ting;  Feng, Yan-Lei;  Liu, Bing;  Hai, Li-Si;  Wen, Jun;  Chen, Zhi-Duan
Adobe PDF(5547Kb)  |  收藏  |  浏览/下载：87/0  |  提交时间：2022/03/01
biogeographic disjunction  chloroplast genome  Diapensia  Diapensiaceae  phylogeny  taxonomic treatment