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Mutational meltdown or controlled chain reaction: The dynamics of rapid plastome evolution in the hyperdiversity of Poaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023, 卷号: 61, 期号: 2, 页码: 328-344
作者:  Wang, Jie;  Fu, Gao-Fei;  Tembrock, Luke R.;  Liao, Xue-Zhu;  Ge, Song;  Wu, Zhi-Qiang
Adobe PDF(2463Kb)  |  收藏  |  浏览/下载：17/0  |  提交时间：2024/03/07
C-4 photosynthesis  evolutionary rate  inverted repeats  monocots  plastome size  
The associated evolution among the extensive RNA editing, GC-biased mutation, and PPR family expansion in the organelle genomes of Selaginellaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022
作者:  Kang, Jong-Soo;  Yu, Jigao;  Zhang, Xian-Chun;  Xiang, Qiao-Ping
Adobe PDF(1627Kb)  |  收藏  |  浏览/下载：10/0  |  提交时间：2024/03/07
GC-biased mutation  mitochondrial genome (mitogenome)  pentatricopeptide repeat (PPR) protein  plastid genome (plastome)  RNA editing  Selaginellaceae  
Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1
作者:  Dong, Wenpan;  Li, Enze;  Liu, Yanlei;  Xu, Chao;  Wang, Yushuang;  Liu, Kangjia;  Cui, Xingyong;  Sun, Jiahui;  Suo, Zhili;  Zhang, Zhixiang;  Wen, Jun;  Zhou, Shiliang
Adobe PDF(4457Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Ancient introgression  Gene tree conflict  Incomplete lineage sorting  Oleaceae  Phylogenomics  Rate heterogeneity  
Can cropland management practices lower net greenhouse emissions without compromising yield? 期刊论文
GLOBAL CHANGE BIOLOGY, 2021, 卷号: 27, 期号: 19, 页码: 4657-4670
作者:  Shang, Ziyin;  Abdalla, Mohamed;  Xia, Longlong;  Zhou, Feng;  Sun, Wenjuan;  Smith, Pete
Adobe PDF(1662Kb)  |  收藏  |  浏览/下载：83/0  |  提交时间：2023/02/24
global warming  manure substitution  net greenhouse gas balance  residue retention  water saving  zero-tillage  
Comparative Plastome Analysis of Root- and Stem-Feeding Parasites of Santalales Untangle the Footprints of Feeding Mode and Lifestyle Transitions 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2020, 卷号: 12, 期号: 1, 页码: 3663-3676
作者:  Chen, Xiaoli;  Fang, Dongming;  Wu, Chenyu;  Liu, Bing;  Liu, Yang;  Sahu, Sunil Kumar;  Song, Bo;  Yang, Shuai;  Yang, Tuo;  Wei, Jinpu;  Wang, Xuebing;  Zhang, Wen;  Xu, Qiwu;  Wang, Huafeng;  Yuan, Langxing;  Liao, Xuezhu;  Chen, Lipeng;  Chen, Ziqiang;  Yuan, Fu;  Chang, Yue;  Lu, Lihua;  Yang, Huanming;  Wang, Jian;  Xu, Xun;  Liu, Xin;  Wicke, Susann;  Liu, Huan
Adobe PDF(1193Kb)  |  收藏  |  浏览/下载：95/0  |  提交时间：2022/03/01
parasitic plants  Santalales  reductive plastome evolution  selection  feeding mode  Balanophoraceae  
Plastome-based phylogenomics resolves the placement of the sanguinolenta group in the spikemoss of lycophyte (Selaginellaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2020, 卷号: 147
作者:  Zhang, Hong-Rui;  Wei, Ran;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(1456Kb)  |  收藏  |  浏览/下载：93/0  |  提交时间：2022/03/01
GC content  Nucleotide substitution rate  Phylogeny  Plastome  Sanguinolenta group  
Evolutionary directions of single nucleotide substitutions and structural mutations in the chloroplast genomes of the family Calycanthaceae 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2020, 卷号: 20, 期号: 1
作者:  Dong, Wenpan;  Xu, Chao;  Wen, Jun;  Zhou, Shiliang
Adobe PDF(870Kb)  |  收藏  |  浏览/下载：93/0  |  提交时间：2022/03/01
Chloroplast genome  Calycanthaceae  Structural mutations  Substitution rate  Indels  
The Unique Evolutionary Trajectory and Dynamic Conformations of DR and IR/DR-Coexisting Plastomes of the Early Vascular Plant Selaginellaceae (Lycophyte) 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2019, 卷号: 11, 期号: 4, 页码: 1258-1274
作者:  Zhang, Hong-Rui;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(1212Kb)  |  收藏  |  浏览/下载：88/0  |  提交时间：2022/01/06
gene loss  homologous recombination  DR/IR evolution  Selaginella  substitution rate  time divergence  
Phylogenomics of Orchidaceae based on plastid and mitochondrial genomes 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 139
作者:  Li, Yun-Xia;  Li, Zhang-Hai;  Schuiteman, Andre;  Chase, Mark W.;  Li, Jian-Wu;  Huang, Wei-Chang;  Hidayat, Arief;  Wu, Sha-Sha;  Jin, Xiao-Hua
Adobe PDF(3316Kb)  |  收藏  |  浏览/下载：112/0  |  提交时间：2022/01/06
Cypripedioideae  Mitochondrial genome  Mycoheterotrophic orchids  Orchidaceae  Plastid genome  Vanilloideae  
De novo assembly of white poplar genome and genetic diversity of white poplar population in Irtysh River basin in China 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2019, 卷号: 62, 期号: 5, 页码: 609-618
作者:  Liu, Yan-Jing;  Wang, Xiao-Ru;  Zeng, Qing-Yin
Adobe PDF(2091Kb)  |  收藏  |  浏览/下载：76/0  |  提交时间：2022/01/06
Populus alba  de novo assembly  genetic diversity  population expansion