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Phylogenomic relationships and species identification of the olive genus Olea (Oleaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 6, 页码: 1263-1280
作者:  Dong, Wen-Pan;  Sun, Jia-Hui;  Liu, Yan-Lei;  Xu, Chao;  Wang, Yi-Heng;  Suo, Zhi-Li;  Zhou, Shi-Liang;  Zhang, Zhi-Xiang;  Wen, Jun
Adobe PDF(2070Kb)  |  收藏  |  浏览/下载：7/0  |  提交时间：2024/03/07
Olea  phylogenomics  specific DNA barcode  species identification  super-barcode  
Out of the Pan-Himalaya: Evolutionary history of the Paeoniaceae revealed by phylogenomics 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1170-1182
作者:  Zhou, Shi-Liang;  Xu, Chao;  Liu, Jing;  Yu, Yan;  Wu, Ping;  Cheng, Tao;  Hong, De-Yuan
Adobe PDF(1288Kb)  |  收藏  |  浏览/下载：65/0  |  提交时间：2023/02/24
biogeography  molecular dating  Paeonia  phylogeny  reticulate evolution  
NOVOWrap: An automated solution for plastid genome assembly and structure standardization 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2021, 卷号: 21, 期号: 6, 页码: 2177-2186
作者:  Wu, Ping;  Chen, Hao;  Xu, Chao;  Yang, Jie;  Zhang, Xian Chun;  Zhou, Shi Liang
Adobe PDF(924Kb)  |  收藏  |  浏览/下载：69/1  |  提交时间：2023/02/24
assembly  plastid genome  standardized structure  
Molecular phylogeny and species delimitation of Stachyuraceae: Advocating a herbarium specimen-based phylogenomic approach in resolving species boundaries 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020, 卷号: 58, 期号: 5, 页码: 710-724
作者:  Su, Jun-Xia;  Dong, Cong-Cong;  Niu, Yan-Ting;  Lu, Li-Min;  Xu, Chao;  Liu, Bing;  Zhou, Shi-Liang;  Lu, An-Ming;  Zhu, Yu-Ping;  Wen, Jun;  Chen, Zhi-Duan
Adobe PDF(1772Kb)  |  收藏  |  浏览/下载：103/0  |  提交时间：2022/03/01
chloroplast genome  DNA reconstruction  phylogeny  specimen-based taxon sampling  Stachyuraceae  
Phylogenomic analyses of the Photinia complex support the recognition of a new genus Phippsiomeles and the resurrection of a redefined Stranvaesia in Maleae (Rosaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 卷号: 57, 期号: 6, 页码: 678-694
作者:  Liu, Bin-Bin;  Hong, De-Yuan;  Zhou, Shi-Liang;  Xu, Chao;  Dong, Wen-Pan;  Johnson, Gabriel;  Wen, Jun
Adobe PDF(1734Kb)  |  收藏  |  浏览/下载：103/0  |  提交时间：2022/01/06
genome skimming  hybridization  Maleae  nrDNA  Phippsiomeles  Rosaceae  Stranvaesia  
The Gastrodia elata genome provides insights into plant adaptation to heterotrophy 期刊论文
NATURE COMMUNICATIONS, 2018, 卷号: 9
作者:  Yuan, Yuan;  Jin, Xiaohua;  Liu, Juan;  Zhao, Xing;  Zhou, Junhui;  Wang, Xin;  Wang, Deyi;  Lai, Changjiangsheng;  Xu, Wei;  Huang, Jingwen;  Zha, Liangping;  Liu, Dahui;  Ma, Xiao;  Wang, Li;  Zhou, Menyan;  Jiang, Zhi;  Meng, Hubiao;  Peng, Huasheng;  Liang, Yuting;  Li, Ruiqiang;  Jiang, Chao;  Zhao, Yuyang;  Nan, Tiegui;  Jin, Yan;  Zhan, Zhilai;  Yang, Jian;  Jiang, Wenkai;  Huang, Luqi
Adobe PDF(1478Kb)  |  收藏  |  浏览/下载：103/0  |  提交时间：2022/02/25
The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6
作者:  Zhang, Guo-Qiang;  Xu, Qing;  Bian, Chao;  Tsai, Wen-Chieh;  Yeh, Chuan-Ming;  Liu, Ke-Wei;  Yoshida, Kouki;  Zhang, Liang-Sheng;  Chang, Song-Bin;  Chen, Fei;  Shi, Yu;  Su, Yong-Yu;  Zhang, Yong-Qiang;  Chen, Li-Jun;  Yin, Yayi;  Lin, Min;  Huang, Huixia;  Deng, Hua;  Wang, Zhi-Wen;  Zhu, Shi-Lin;  Zhao, Xiang;  Deng, Cao;  Niu, Shan-Ce;  Huang, Jie;  Wang, Meina;  Liu, Guo-Hui;  Yang, Hai-Jun;  Xiao, Xin-Ju;  Hsiao, Yu-Yun;  Wu, Wan-Lin;  Chen, You-Yi;  Mitsuda, Nobutaka;  Ohme-Takagi, Masaru;  Luo, Yi-Bo;  Van de Peer, Yves;  Liu, Zhong-Jian
Adobe PDF(1922Kb)  |  收藏  |  浏览/下载：85/0  |  提交时间：2022/07/08
A community-derived classification for extant lycophytes and ferns 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 6, 页码: 563-603
作者:  Schuettpelz, Eric;  Schneider, Harald;  Smith, Alan R.;  Hovenkamp, Peter;  Prado, Jefferson;  Rouhan, Germinal;  Salino, Alexandre;  Sundue, Michael;  Almeida, Thais Elias;  Parris, Barbara;  Sessa, Emily B.;  Field, Ashley R.;  de Gasper, Andre Luis;  Rothfels, Carl J.;  Windham, Michael D.;  Lehnert, Marcus;  Dauphin, Benjamin;  Ebihara, Atsushi;  Lehtonen, Samuli;  Schwartsburd, Pedro Bond;  Metzgar, Jordan;  Zhang, Li-Bing;  Kuo, Li-Yaung;  Brownsey, Patrick J.;  Kato, Masahiro;  Arana, Marcelo Daniel;  Assis, Francine C.;  Barker, Michael S.;  Barrington, David S.;  Chang, Ho-Ming;  Chang, Yi-Han;  Chao, Yi-Shan;  Chen, Cheng-Wei;  Chen, De-Kui;  Chiou, Wen-Liang;  Dittrich, Vinicius Antonio de Oliveira;  Duan, Yi-Fan;  Dubuisson, Jean-Yves;  Farrar, Donald R.;  Fawcett, Susan;  Gabriel y Galan, Jose Maria;  Goes-Neto, Luiz Armando de Araujo;  Grant, Jason R.;  Grusz, Amanda L.;  Haufler, Christopher;  Hauk, Warren;  He, Hai;  Hennequin, Sabine;  Hirai, Regina Yoshie;  Huiet, Layne;  Kessler, Michael;  Korall, Petra;  Labiak, Paulo H.;  Larsson, Anders;  Leon, Blanca;  Li, Chun-Xiang;  Li, Fay-Wei;  Link-Perez, Melanie;  Liu, Hong-Mei;  Ngan Thi Lu;  Meza-Torres, Esteban I.;  Miao, Xin-Yuan;  Moran, Robbin;  Mynssen, Claudine Massi;  Nagalingum, Nathalie;  Ollgaard, Benjamin;  Paul, Alison M.;  Pereira, Jovani B. de S.;  Perrie, Leon R.;  Ponce, Monica;  Ranker, Tom A.;  Schulz, Christian;  Shinohara, Wataru;  Shmakov, Alexander;  Sigel, Erin M.;  de Souza, Filipe Soares;  Sylvestre, Lana da Silva;  Testo, Weston;  Triana-Moreno, Luz Amparo;  Tsutsumi, Chie;  Tuomisto, Hanna;  Valdespino, Ivan A.;  Vasco, Alejandra;  Viveros, Raquel Stauffer;  Weakley, Alan;  Wei, Ran;  Weststrand, Stina;  Wolf, Paul G.;  Yatskievych, George;  Xu, Xiao-Gang;  Yan, Yue-Hong;  Zhang, Liang;  Zhang, Xian-Chun;  Zhou, Xin-Mao
Adobe PDF(687Kb)  |  收藏  |  浏览/下载：350/0  |  提交时间：2022/07/08
classification  ferns  lycophytes  monophyly  phylogeny  pteridophytes  
Multiple species of wild tree peonies gave rise to the King of Flowers, Paeonia suffruticosa Andrews 期刊论文
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2014, 卷号: 281, 期号: 1797, 页码: 20141687
作者:  Shi-Liang Zhou;  Xin-Hui Zou;  Zhi-Qin Zhou;  Jing Liu;  Chao Xu;  Jing Yu;  Qiang Wang;  Da-Ming Zhang;  Xiao-Quan Wang;  Song Ge;  Tao Sang;  Kai-Yu Pan;  De-Yuan Hong
Adobe PDF(696Kb)  |  收藏  |  浏览/下载：138/0  |  提交时间：2018/12/07
Multiple species of wild tree peonies gave rise to the 'king of flowers', Paeonia suffruticosa Andrews 期刊论文
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2014, 卷号: 281, 期号: 1797
作者:  Zhou, Shi-Liang;  Zou, Xin-Hui;  Zhou, Zhi-Qin;  Liu, Jing;  Xu, Chao;  Yu, Jing;  Wang, Qiang;  Zhang, Da-Ming;  Wang, Xiao-Quan;  Ge, Song;  Sang, Tao;  Pan, Kai-Yu;  Hong, De-Yuan
Adobe PDF(730Kb)  |  收藏  |  浏览/下载：39/0  |  提交时间：2023/03/30
conservation  hybridization  Paeonia  RNA-seq  species tree