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Genomes shed light on the evolution of Begonia, a mega-diverse genus 期刊论文
NEW PHYTOLOGIST, 2022, 卷号: 234, 期号: 1, 页码: 295-310
作者:  Li, Lingfei;  Chen, Xiaoli;  Fang, Dongming;  Dong, Shanshan;  Guo, Xing;  Li, Na;  Campos-Dominguez, Lucia;  Wang, Wenguang;  Liu, Yang;  Lang, Xiaoan;  Peng, Yang;  Tian, Daike;  Thomas, Daniel C.;  Mu, Weixue;  Liu, Min;  Wu, Chenyu;  Yang, Ting;  Zhang, Suzhou;  Yang, Leilei;  Yang, Jianfen;  Liu, Zhong-Jian;  Zhang, Liangsheng;  Zhang, Xingtan;  Chen, Fei;  Jiao, Yuannian;  Guo, Yalong;  Hughes, Mark;  Wang, Wei;  Liu, Xiaofei;  Zhong, Chunmei;  Li, Airong;  Sahu, Sunil Kumar;  Yang, Huanming;  Wu, Ernest;  Sharbrough, Joel;  Lisby, Michael;  Liu, Xin;  Xu, Xun;  Soltis, Douglas E.;  Van de Peer, Yves;  Kidner, Catherine;  Zhang, Shouzhou;  Liu, Huan
Adobe PDF(3399Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Begonia  evolution  genomes  introgression  shade adaptation  whole-genome duplication  
Ancient plastid genomes solve the tree species mystery of the imperial wood Nanmu in the Forbidden City, the largest existing wooden palace complex in the world 期刊论文
PLANTS PEOPLE PLANET, 2022, 卷号: 4, 期号: 6, 页码: 696-709
作者:  Jiao, Lichao;  Lu, Yang;  Zhang, Ming;  Chen, Yongping;  Wang, Zhaoshan;  Guo, Yu;  Xu, Chao;  Guo, Juan;  He, Tuo;  Ma, Lingyu;  Gao, Wenqiang;  Wang, Jie;  Zhou, Shiliang;  Zhang, Yonggang;  Jiang, Xiaomei;  Baas, Pieter;  Yin, Yafang
Adobe PDF(31430Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
ancient DNA  archeological wood  Forbidden City  Phoebe  species identification  wood anatomy  
Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress 期刊论文
BMC PLANT BIOLOGY, 2022, 卷号: 22, 期号: 1
作者:  Zhang, Xiao-Xia;  Ren, Xiao-Long;  Qi, Xiao-Tong;  Yang, Zhi-Min;  Feng, Xiao-Lei;  Zhang, Tian;  Wang, Hui-Jie;  Liang, Peng;  Jiang, Qi-Ying;  Yang, Wen-Jun;  Fu, Yuan;  Chen, Min;  Fu, Zhi-Xi;  Xu, Bo
Adobe PDF(6746Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Calcineurin B-like protein (CBL)  CBL-interacting protein kinase (CIPK)  Gene family evolution  Duplicate genes  Stress response  Medicago  
Genomic basis of the giga-chromosomes and giga-genome of tree peony Paeonia ostii 期刊论文
NATURE COMMUNICATIONS, 2022, 卷号: 13, 期号: 1
作者:  Yuan, Junhui;  Jiang, Sanjie;  Jian, Jianbo;  Liu, Mingyu;  Yue, Zhen;  Xu, Jiabao;  Li, Juan;  Xu, Chunyan;  Lin, Lihong;  Jing, Yi;  Zhang, Xiaoxiao;  Chen, Haixin;  Zhang, Linjuan;  Fu, Tao;  Yu, Shuiyan;  Wu, Zhangyan;  Zhang, Ying;  Wang, Chongzhi;  Zhang, Xiao;  Huang, Liangbo;  Wang, Hongqi;  Hong, Deyuan;  Chen, Xiao-Ya;  Hu, Yonghong
Adobe PDF(3366Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Genome size evolution of the extant lycophytes and ferns 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 2, 页码: 141-152
作者:  Wang, Fa-Guo;  Wang, Ai-Hua;  Bai, Cheng-Ke;  Jin, Dong-Mei;  Nie, Li-Yun;  Harris, A. J.;  Che, Le;  Wang, Juan-Juan;  Li, Shi-Yu;  Xu, Lei;  Shen, Hui;  Gu, Yu-Feng;  Shang, Hui;  Duan, Lei;  Zhang, Xian-Chun;  Chen, Hong-Feng;  Yan, Yue-Hong
Adobe PDF(2515Kb)  |  收藏  |  浏览/下载：10/0  |  提交时间：2024/03/07
Genome size  Ferns  Chromosome numbers  Habitat type  Whole-genome duplications  Evolution  
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Diversity, phylogeny, and adaptation of bryophytes: insights from genomic and transcriptomic data 期刊论文
JOURNAL OF EXPERIMENTAL BOTANY, 2022, 卷号: 73, 期号: 13, 页码: 4306-4322
作者:  Wang, Qing-Hua;  Zhang, Jian;  Liu, Yang;  Jia, Yu;  Jiao, Yuan-Nian;  Xu, Bo;  Chen, Zhi-Duan
Adobe PDF(4396Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Adaptation  genome  hornworts  liverworts  mosses  plant terrestrialization  transcriptome  
A genome for Cissus illustrates features underlying its evolutionary success in dry savannas 期刊论文
HORTICULTURE RESEARCH, 2022, 卷号: 9
作者:  Xin, Haiping;  Wang, Yi;  Li, Qingyun;  Wan, Tao;  Hou, Yujun;  Liu, Yuanshuang;  Gichuki, Duncan Kiragu;  Zhou, Huimin;  Zhu, Zhenfei;  Xu, Chen;  Zhou, Yadong;  Liu, Zhiming;  Li, Rongjun;  Liu, Bing;  Lu, Limin;  Jiang, Hongsheng;  Zhang, Jisen;  Wan, Junnan;  Aryal, Rishi;  Hu, Guangwan;  Chen, Zhiduan;  Gituru, Robert Wahiti;  Liang, Zhenchang;  Wen, Jun;  Wang, Qingfeng
Adobe PDF(2841Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Method for quick DNA barcode reference library construction 期刊论文
ECOLOGY AND EVOLUTION, 2021, 卷号: 11, 期号: 17, 页码: 11627-11638
作者:  Liu, Yanlei;  Xu, Chao;  Sun, Yuzhe;  Chen, Xun;  Dong, Wenpan;  Yang, Xueying;  Zhou, Shiliang
Adobe PDF(592Kb)  |  收藏  |  浏览/下载：65/0  |  提交时间：2023/02/24
Cotu  data processing method  DNA barcode  next-generation sequencing  
NOVOWrap: An automated solution for plastid genome assembly and structure standardization 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2021, 卷号: 21, 期号: 6, 页码: 2177-2186
作者:  Wu, Ping;  Chen, Hao;  Xu, Chao;  Yang, Jie;  Zhang, Xian Chun;  Zhou, Shi Liang
Adobe PDF(924Kb)  |  收藏  |  浏览/下载：69/1  |  提交时间：2023/02/24
assembly  plastid genome  standardized structure