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Fire-prone Rhamnaceae with South African affinities in Cretaceous Myanmar amber 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 2, 页码: 125-135
作者:  Shi, Chao;  Wang, Shuo;  Cai, Hao-Hong;  Zhang, Hong-Rui;  Long, Xiao-Xuan;  Tihelka, Erik;  Song, Wei-cai;  Feng, Qi;  Jiang, Ri-xin;  Cai, Chen-Yang;  Lombard, Natasha;  Li, Xiong;  Yuan, Ji;  Zhu, Jian-ping;  Yang, Hui-yu;  Liu, Xiao-fan;  Xiang, Qiao-ping;  Zhao, Zun-tian;  Long, Chun-lin;  Schneider, Harald;  Zhang, Xian-chun;  Peng, Hua;  Li, De-Zhu;  Fan, Yong;  Engel, Michael S.;  Wang, Yong-Dong;  Spicer, Robert A.
Adobe PDF(3877Kb)  |  收藏  |  浏览/下载：12/0  |  提交时间：2024/03/07
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
The Cycas genome and the early evolution of seed plants 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 4, 页码: 389+
作者:  Liu, Yang;  Wang, Sibo;  Li, Linzhou;  Yang, Ting;  Dong, Shanshan;  Wei, Tong;  Wu, Shengdan;  Liu, Yongbo;  Gong, Yiqing;  Feng, Xiuyan;  Ma, Jianchao;  Chang, Guanxiao;  Huang, Jinling;  Yang, Yong;  Wang, Hongli;  Liu, Min;  Xu, Yan;  Liang, Hongping;  Yu, Jin;  Cai, Yuqing;  Zhang, Zhaowu;  Fan, Yannan;  Mu, Weixue;  Sahu, Sunil Kumar;  Liu, Shuchun;  Lang, Xiaoan;  Yang, Leilei;  Li, Na;  Habib, Sadaf;  Yang, Yongqiong;  Lindstrom, Anders J.;  Liang, Pei;  Goffinet, Bernard;  Zaman, Sumaira;  Wegrzyn, Jill L.;  Li, Dexiang;  Liu, Jian;  Cui, Jie;  Sonnenschein, Eva C.;  Wang, Xiaobo;  Ruan, Jue;  Xue, Jia-Yu;  Shao, Zhu-Qing;  Song, Chi;  Fan, Guangyi;  Li, Zhen;  Zhang, Liangsheng;  Liu, Jianquan;  Liu, Zhong-Jian;  Jiao, Yuannian;  Wang, Xiao-Quan;  Wu, Hong;  Wang, Ertao;  Lisby, Michael;  Yang, Huanming;  Wang, Jian;  Liu, Xin;  Xu, Xun;  Li, Nan;  Soltis, Pamela S.;  Van de Peer, Yves;  Soltis, Douglas E.;  Gong, Xun;  Liu, Huan;  Zhang, Shouzhou
Adobe PDF(10553Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Out of the Pan-Himalaya: Evolutionary history of the Paeoniaceae revealed by phylogenomics 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1170-1182
作者:  Zhou, Shi-Liang;  Xu, Chao;  Liu, Jing;  Yu, Yan;  Wu, Ping;  Cheng, Tao;  Hong, De-Yuan
Adobe PDF(1288Kb)  |  收藏  |  浏览/下载：66/0  |  提交时间：2023/02/24
biogeography  molecular dating  Paeonia  phylogeny  reticulate evolution  
Capturing single-copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in Vitaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 5, 页码: 1124-1138
作者:  Liu, Bin-Bin;  Ma, Zhi-Yao;  Ren, Chen;  Hodel, Richard G. J.;  Sun, Miao;  Liu, Xiu-Qun;  Liu, Guang-Ning;  Hong, De-Yuan;  Zimmer, Elizabeth A.;  Wen, Jun
Adobe PDF(2650Kb)  |  收藏  |  浏览/下载：69/0  |  提交时间：2023/02/24
deep genome skimming  Hyb-Seq  mitochondrial genes  nuclear ribosomal DNA  single-copy nuclear genes  Vitaceae  
Gen-morph species concept-A new and integrative species concept for outbreeding organisms 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020, 卷号: 58, 期号: 5, 页码: 725-742
作者:  Hong, De-Yuan
Adobe PDF(5144Kb)  |  收藏  |  浏览/下载：104/0  |  提交时间：2022/03/01
continuous or discontinuous variations  cross-compatible  gene flow  isolation  lineage  monophyly  outbreeding organism  PaeoniaL  statistics  
The water lily genome and the early evolution of flowering plants 期刊论文
NATURE, 2020, 卷号: 577, 页码: 79-84
作者:  Zhang, Liangsheng;  Chen, Fei;  Zhang, Xingtan;  Li, Zhen;  Zhao, Yiyong;  Lohaus, Rolf;  Chang, Xiaojun;  Dong, Wei;  Ho, Simon Y. W.;  Liu, Xing;  Song, Aixia;  Chen, Junhao;  Guo, Wenlei;  Wang, Zhengjia;  Zhuang, Yingyu;  Wang, Haifeng;  Chen, Xuequn;  Hu, Juan;  Liu, Yanhui;  Qin, Yuan;  Wang, Kai;  Dong, Shanshan;  Liu, Yang;  Zhang, Shouzhou;  Yu, Xianxian;  Wu, Qian;  Wang, Liangsheng;  Yan, Xueqing;  Jiao, Yuannian;  Kong, Hongzhi;  Zhou, Xiaofan;  Yu, Cuiwei;  Chen, Yuchu;  Li, Fan;  Wang, Jihua;  Chen, Wei;  Chen, Xinlu;  Jia, Qidong;  Zhang, Chi;  Jiang, Yifan;  Zhang, Wanbo;  Liu, Guanhua;  Fu, Jianyu;  Chen, Feng;  Ma, Hong;  Van de Peer, Yves;  Tang, Haibao
Adobe PDF(56231Kb)  |  收藏  |  浏览/下载：115/1  |  提交时间：2022/03/01
The hornwort genome and early land plant evolution 期刊论文
NATURE PLANTS, 2020, 卷号: 6, 期号: 2, 页码: 107-118
作者:  Zhang, Jian;  Fu, Xin-Xing;  Li, Rui-Qi;  Zhao, Xiang;  Liu, Yang;  Li, Ming-He;  Zwaenepoel, Arthur;  Ma, Hong;  Goffinet, Bernard;  Guan, Yan-Long;  Xue, Jia-Yu;  Liao, Yi-Ying;  Wang, Qing-Feng;  Wang, Qing-Hua;  Wang, Jie-Yu;  Zhang, Guo Qiang;  Wang, Zhi-Wen;  Jia, Yu;  Wang, Mei-Zhi;  Dong, Shan-Shan;  Yang, Jian-Fen;  Jiao, Yuan-Nian;  Guo, Ya-Long;  Kong, Hong-Zhi;  Lu, An-Ming;  Yang, Huan-Ming;  Zhang, Shou-Zhou;  Van de Peer, Yves;  Liu, Zhong-Jian;  Chen, Zhi-Duan
Adobe PDF(1845Kb)  |  收藏  |  浏览/下载：110/1  |  提交时间：2022/03/01
A synopsis of the expanded Rhaphiolepis (Maleae, Rosaceae) 期刊论文
PHYTOKEYS, 2020, 期号: 154, 页码: 19-55
作者:  Liu, Bin-Bin;  Wang, Yu-Bing;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(2482Kb)  |  收藏  |  浏览/下载：98/0  |  提交时间：2022/03/01
Eriobotrya  lectotype  new name  nomenclature  taxonomy  typification  validation  
Phylogenetic relationships and chloroplast capture in the Amelanchier-Malacomeles-Peraphyllum clade (Maleae, Rosaceae): Evidence from chloroplast genome and nuclear ribosomal DNA data using genome skimming 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2020, 卷号: 147
作者:  Liu, Bin-Bin;  Campbell, Christopher S.;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(2972Kb)  |  收藏  |  浏览/下载：93/0  |  提交时间：2022/03/01
Chloroplast capture  Hybridization  Maleae  Nuclear ribosomal DNA  Plastome  Rosaceae