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Identification of the target genes of AqAPETALA3-3 (AqAP3-3) in Aquilegia coerulea (Ranunculaceae) helps understand the molecular bases of the conserved and nonconserved features of petals 期刊论文
NEW PHYTOLOGIST, 2020, 卷号: 227, 期号: 4, 页码: 1235-1248
作者:  Jiang, Yongchao;  Wang, Meimei;  Zhang, Rui;  Xie, Jinghe;  Duan, Xiaoshan;  Shan, Hongyan;  Xu, Guixia;  Kong, Hongzhi
Adobe PDF(1459Kb)  |  收藏  |  浏览/下载：95/1  |  提交时间：2022/03/01
Aquilegia  binding sites  ChIP-seq  floral organ identity genes  petals  target genes  
A chromosome-scale reference genome of Aquilegia oxysepala var. kansuensis 期刊论文
HORTICULTURE RESEARCH, 2020, 卷号: 7, 期号: 1
作者:  Xie, Jinghe;  Zhao, Haifeng;  Li, Kunpeng;  Zhang, Rui;  Jiang, Yongchao;  Wang, Meimei;  Guo, Xuelian;  Yu, Ben;  Kong, Hongzhi;  Jiao, Yuannian;  Xu, Guixia
Adobe PDF(2806Kb)  |  收藏  |  浏览/下载：126/1  |  提交时间：2022/03/01
Identification of the Key Regulatory Genes Involved in Elaborate Petal Development and Specialized Character Formation in Nigella damascena (Ranunculaceae)([OPEN]) 期刊论文
PLANT CELL, 2020, 卷号: 32, 期号: 10, 页码: 3095-3112
作者:  Zhang, Rui;  Fu, Xuehao;  Zhao, Caiyao;  Cheng, Jie;  Liao, Hong;  Wang, Peipei;  Yao, Xu;  Duan, Xiaoshan;  Yuan, Yi;  Xu, Guixia;  Kramer, Elena M.;  Shan, Hongyan;  Kong, Hongzhi
Adobe PDF(4111Kb)  |  收藏  |  浏览/下载：116/1  |  提交时间：2022/03/01
Resequencing 545 ginkgo genomes across the world reveals the evolutionary history of the living fossil 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10
作者:  Zhao, Yun-Peng;  Fan, Guangyi;  Yin, Ping-Ping;  Sun, Shuai;  Li, Ning;  Hong, Xiaoning;  Hu, Gang;  Zhang, He;  Zhang, Fu-Min;  Han, Jing-Dan;  Hao, Ya-Jun;  Xu, Qiwu;  Yang, Xianwei;  Xia, Wenjie;  Chen, Wenbin;  Lin, Han-Yang;  Zhang, Rui;  Chen, Jiang;  Zheng, Xiao-Ming;  Lee, Simon Ming-Yuen;  Lee, Joongku;  Uehara, Koichi;  Wang, Jian;  Yang, Huanming;  Fu, Cheng-Xin;  Liu, Xin;  Xu, Xun;  Ge, Song
Adobe PDF(2992Kb)  |  收藏  |  浏览/下载：119/0  |  提交时间：2022/01/06
Chloroplast genomic data provide new and robust insights into the phylogeny and evolution of the Ranunculaceae 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 135, 页码: 12-21
作者:  Zhai, Wei;  Duan, Xiaoshan;  Zhang, Rui;  Guo, Chunce;  Li, Lin;  Xu, Guixia;  Shan, Hongyan;  Kong, Hongzhi;  Ren, Yi
Adobe PDF(2330Kb)  |  收藏  |  浏览/下载：114/0  |  提交时间：2022/01/06
Ranunculaceae  Chloroplast genome  Phylogeny  Divergence time  Character evolution  
The genomes of pecan and Chinese hickory provide insights into Carya evolution and nut nutrition 期刊论文
GIGASCIENCE, 2019, 卷号: 8, 期号: 5
作者:  Huang, Youjun;  Xiao, Lihong;  Zhang, Zhongren;  Zhang, Rui;  Wang, Zhengjia;  Huang, Chunying;  Huang, Ren;  Luan, Yumeng;  Fan, Tongqiang;  Wang, Jianhua;  Shen, Chen;  Zhang, Shenmei;  Wang, Xinwang;  Randall, Jennifer;  Zheng, Bingsong;  Wu, Jiasheng;  Zhang, Qixiang;  Xia, Guohua;  Xu, Chuanmei;  Chen, Ming;  Zhang, Liangsheng;  Jiang, Wenkai;  Gao, Lizhi;  Chen, Zhiduan;  Leslie, Charles A.;  Grauke, L. J.;  Huang, Jianqin
Adobe PDF(6315Kb)  |  收藏  |  浏览/下载：96/0  |  提交时间：2022/01/06
Carya  pecan  Chinese hickory  whole-genome sequence  adaptive evolution  nutritional value  genetic improvement  
Bridging evolution and development in plants 期刊论文
NEW PHYTOLOGIST, 2016, 卷号: 212, 期号: 4, 页码: 827-830
作者:  Liao, Irene T.;  Shan, Hongyan;  Xu, Guixia;  Zhang, Rui
Adobe PDF(171Kb)  |  收藏  |  浏览/下载：71/0  |  提交时间：2022/07/08
Prevalent Exon-Intron Structural Changes in the APETALA1/FRUITFULL, SEPALLATA, AGAMOUS-LIKE6, and FLOWERING LOCUS C MADS-Box Gene Subfamilies Provide New Insights into Their Evolution 期刊论文
FRONTIERS IN PLANT SCIENCE, 2016, 卷号: 7
作者:  Yu, Xianxian;  Duan, Xiaoshan;  Zhang, Rui;  Fu, Xuehao;  Ye, Lingling;  Kong, Hongzhi;  Xu, Guixia;  Shan, Hongyan
Adobe PDF(4457Kb)  |  收藏  |  浏览/下载：77/0  |  提交时间：2022/07/08
APETALA1/FRUITFULL  SEPALLATA  AGAMOUS-LIKE6  FLOWERING LOCUS C  exon-intron structural change  
Interactions among proteins of floral MADS-box genes in Nuphar pumila (Nymphaeaceae) and the most recent common ancestor of extant angiosperms help understand the underlying mechanisms of the origin of the flower 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2015, 卷号: 53, 期号: 4, 页码: 285-296
作者:  Li, Lin;  Yu, Xian-Xian;  Guo, Chun-Ce;  Duan, Xiao-Shan;  Shan, Hong-Yan;  Zhang, Rui;  Xu, Gui-Xia;  Kong, Hong-Zhi
Adobe PDF(3530Kb)  |  收藏  |  浏览/下载：65/0  |  提交时间：2022/09/13
ancestral genes  floral MADS-box genes  Nuphar pumila  protein-protein interaction (PPI)