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Parallel evolution of apetalous lineages within the buttercup family (Ranunculaceae): outward expansion ofAGAMOUS1, rather than disruption ofAPETALA3-3 期刊论文
PLANT JOURNAL, 2020, 卷号: 104, 期号: 5, 页码: 1169-1181
Authors:  Duan, Xiaoshan;  Zhao, Caiyao;  Jiang, Yongchao;  Zhang, Rui;  Shan, Hongyan;  Kong, Hongzhi
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parallel evolution  petal loss  homeotic transformation  organ identity program  Ranunculaceae  
Identification of the target genes of AqAPETALA3-3 (AqAP3-3) in Aquilegia coerulea (Ranunculaceae) helps understand the molecular bases of the conserved and nonconserved features of petals 期刊论文
NEW PHYTOLOGIST, 2020, 卷号: 227, 期号: 4, 页码: 1235-1248
Authors:  Jiang, Yongchao;  Wang, Meimei;  Zhang, Rui;  Xie, Jinghe;  Duan, Xiaoshan;  Shan, Hongyan;  Xu, Guixia;  Kong, Hongzhi
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Aquilegia  binding sites  ChIP-seq  floral organ identity genes  petals  target genes  
A role for the Auxin Response Factors ARF6 and ARF8 homologs in petal spur elongation and nectary maturation in Aquilegia 期刊论文
NEW PHYTOLOGIST, 2020, 卷号: 227, 期号: 5, 页码: 1392-1405
Authors:  Zhang, Rui;  Min, Ya;  Holappa, Lynn D.;  Walcher-Chevillet, Cristina L.;  Duan, Xiaoshan;  Donaldson, Emily;  Kong, Hongzhi;  Kramer, Elena M.
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Aquilegia  Auxin Response Factor  cell elongation  nectary development  petal spur  
Identification of the Key Regulatory Genes Involved in Elaborate Petal Development and Specialized Character Formation in Nigella damascena (Ranunculaceae)([OPEN]) 期刊论文
PLANT CELL, 2020, 卷号: 32, 期号: 10, 页码: 3095-3112
Authors:  Zhang, Rui;  Fu, Xuehao;  Zhao, Caiyao;  Cheng, Jie;  Liao, Hong;  Wang, Peipei;  Yao, Xu;  Duan, Xiaoshan;  Yuan, Yi;  Xu, Guixia;  Kramer, Elena M.;  Shan, Hongyan;  Kong, Hongzhi
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The morphology, molecular development and ecological function of pseudonectaries on Nigella damascena (Ranunculaceae) petals 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1
Authors:  Liao, Hong;  Fu, Xuehao;  Zhao, Huiqi;  Cheng, Jie;  Zhang, Rui;  Yao, Xu;  Duan, Xiaoshan;  Shan, Hongyan;  Kong, Hongzhi
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The making of elaborate petals in Nigella through developmental repatterning 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 223, 期号: 1, 页码: 385-396
Authors:  Yao, Xu;  Zhang, Wengen;  Duan, Xiaoshan;  Yuan, Yi;  Zhang, Rui;  Shan, Hongyan;  Kong, Hongzhi
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adaptive evolution  developmental repatterning  elaborate petals  Evo-Devo  Nigella  
Chloroplast genomic data provide new and robust insights into the phylogeny and evolution of the Ranunculaceae 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 135, 页码: 12-21
Authors:  Zhai, Wei;  Duan, Xiaoshan;  Zhang, Rui;  Guo, Chunce;  Li, Lin;  Xu, Guixia;  Shan, Hongyan;  Kong, Hongzhi;  Ren, Yi
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Ranunculaceae  Chloroplast genome  Phylogeny  Divergence time  Character evolution  
Flexibility in the structure of spiral flowers and its underlying mechanisms 期刊论文
NATURE PLANTS, 2016, 卷号: 2, 期号: 1
Authors:  Wang, Peipei;  Liao, Hong;  Zhang, Wengen;  Yu, Xianxian;  Zhang, Rui;  Shan, Hongyan;  Duan, Xiaoshan;  Yao, Xu;  Kong, Hongzhi
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Prevalent Exon-Intron Structural Changes in the APETALA1/FRUITFULL, SEPALLATA, AGAMOUS-LIKE6, and FLOWERING LOCUS C MADS-Box Gene Subfamilies Provide New Insights into Their Evolution 期刊论文
FRONTIERS IN PLANT SCIENCE, 2016, 卷号: 7
Authors:  Yu, Xianxian;  Duan, Xiaoshan;  Zhang, Rui;  Fu, Xuehao;  Ye, Lingling;  Kong, Hongzhi;  Xu, Guixia;  Shan, Hongyan
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APETALA1/FRUITFULL  SEPALLATA  AGAMOUS-LIKE6  FLOWERING LOCUS C  exon-intron structural change  
Disruption of the petal identity gene APETALA3-3 is highly correlated with loss of petals within the buttercup family (Ranunculaceae) 期刊论文
Proceedings of the National Academy of Sciences of the United States of America, 2013, 卷号: 110, 期号: 13, 页码: 5074–5079
Authors:  Rui Zhang;  Chunce Guo;  Wengen Zhang;  Peipei Wang;  Lin Li;  Xiaoshan Duan;  Qinggao Du;  Liang Zhao;  Hongyan Shan;  Scott A. Hodges;  Elena M. Kramer;  Yi Ren;  Hongzhi Kong
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