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Integrated phylogenomic analyses unveil reticulate evolution in Parthenocissus (Vitaceae), highlighting speciation dynamics in the Himalayan-Hengduan Mountains 期刊论文
NEW PHYTOLOGIST, 2023, 卷号: 238, 期号: 2, 页码: 888-903
作者:  Yu, Jinren;  Niu, Yanting;  You, Yichen;  Cox, Cymon J.;  Barrett, Russell L.;  Trias-Blasi, Anna;  Guo, Jing;  Wen, Jun;  Lu, Limin;  Chen, Zhiduan
Adobe PDF(4450Kb)  |  收藏  |  浏览/下载：28/0  |  提交时间：2024/03/07
biogeography  comprehensive approach  Himalayan-Hengduan Mountains region  Parthenocissus  phylogenetic discordance  reticulation  speciation reversal  
Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023, 卷号: 61, 期号: 1, 页码: 22-41
作者:  Duan, Lei;  Han, Li-Na;  Liu, Bin-Bin;  Leostrin, Artem;  Harris, A. J.;  Wang, Lin;  Arslan, Emine;  Ertugrul, Kuddisi;  Knyazev, Mikhail;  Hantemirova, Elena;  Wen, Jun;  Chen, Hong-Feng
Adobe PDF(1597Kb)  |  收藏  |  浏览/下载：16/0  |  提交时间：2024/03/07
character evolution  Glycyrrhiza  machine learning analysis  medicinal group  phylogenomics  species delimitation  
TIME FOR COFFEE regulates phytochrome A-mediated hypocotyl growth through dawn-phased signaling 期刊论文
PLANT CELL, 2022, 卷号: 34, 期号: 8, 页码: 2907-2924
作者:  Wang, Yan;  Su, Chen;  Yu, Yingjun;  He, Yuqing;  Wei, Hua;  Li, Na;  Li, Hong;  Duan, Jie;  Li, Bin;  Li, Jigang;  Davis, Seth J.;  Wang, Lei
Adobe PDF(2587Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
Genome size evolution of the extant lycophytes and ferns 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 2, 页码: 141-152
作者:  Wang, Fa-Guo;  Wang, Ai-Hua;  Bai, Cheng-Ke;  Jin, Dong-Mei;  Nie, Li-Yun;  Harris, A. J.;  Che, Le;  Wang, Juan-Juan;  Li, Shi-Yu;  Xu, Lei;  Shen, Hui;  Gu, Yu-Feng;  Shang, Hui;  Duan, Lei;  Zhang, Xian-Chun;  Chen, Hong-Feng;  Yan, Yue-Hong
Adobe PDF(2515Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
Genome size  Ferns  Chromosome numbers  Habitat type  Whole-genome duplications  Evolution  
Gene body demethylation increases expression and is associated with self-pruning during grape genome duplication 期刊论文
HORTICULTURE RESEARCH, 2020, 卷号: 7, 期号: 1
作者:  Zou, Luming;  Liu, Wenwen;  Zhang, Zhan;  Edwards, Everard J.;  Gathunga, Elias Kirabi;  Fan, Peige;  Duan, Wei;  Li, Shaohua;  Liang, Zhenchang
Adobe PDF(5493Kb)  |  收藏  |  浏览/下载：113/0  |  提交时间：2022/03/01
The genomes of pecan and Chinese hickory provide insights into Carya evolution and nut nutrition 期刊论文
GIGASCIENCE, 2019, 卷号: 8, 期号: 5
作者:  Huang, Youjun;  Xiao, Lihong;  Zhang, Zhongren;  Zhang, Rui;  Wang, Zhengjia;  Huang, Chunying;  Huang, Ren;  Luan, Yumeng;  Fan, Tongqiang;  Wang, Jianhua;  Shen, Chen;  Zhang, Shenmei;  Wang, Xinwang;  Randall, Jennifer;  Zheng, Bingsong;  Wu, Jiasheng;  Zhang, Qixiang;  Xia, Guohua;  Xu, Chuanmei;  Chen, Ming;  Zhang, Liangsheng;  Jiang, Wenkai;  Gao, Lizhi;  Chen, Zhiduan;  Leslie, Charles A.;  Grauke, L. J.;  Huang, Jianqin
Adobe PDF(6315Kb)  |  收藏  |  浏览/下载：98/0  |  提交时间：2022/01/06
Carya  pecan  Chinese hickory  whole-genome sequence  adaptive evolution  nutritional value  genetic improvement  
Optimal data partitioning, multispecies coalescent and Bayesian concordance analyses resolve early divergences of the grape family (Vitaceae) 期刊论文
CLADISTICS, 2018, 卷号: 34, 期号: 1, 页码: 57-77
作者:  Lu, Limin;  Cox, Cymon J.;  Mathews, Sarah;  Wang, Wei;  Wen, Jun;  Chen, Zhiduan
Adobe PDF(874Kb)  |  收藏  |  浏览/下载：81/0  |  提交时间：2022/02/25
Phylogeny of the Rosidae: A dense taxon sampling analysis 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 4, 页码: 363-391
作者:  Sun, Miao;  Naeem, Rehan;  Su, Jun-Xia;  Cao, Zhi-Yong;  Burleigh, J. Gordon;  Soltis, Pamela S.;  Soltis, Douglas E.;  Chen, Zhi-Duan
Adobe PDF(1826Kb)  |  收藏  |  浏览/下载：68/0  |  提交时间：2022/07/08
phylogeny  rapid radiation  Rosidae  supermatrix  
The Synthesis and Accumulation of Resveratrol Are Associated with Veraison and Abscisic Acid Concentration in Beihong (Vitis vinifera x Vitis amurensis) Berry Skin 期刊论文
FRONTIERS IN PLANT SCIENCE, 2016, 卷号: 7
作者:  Wang, Junfang;  Wang, Shuqin;  Liu, Guotian;  Edwards, Everard J.;  Duan, Wei;  Li, Shaohua;  Wang, Lijun
Adobe PDF(2907Kb)  |  收藏  |  浏览/下载：70/0  |  提交时间：2022/07/08
abscisic acid  veraison  resveratrol  anthocyanin  grape  
A community-derived classification for extant lycophytes and ferns 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 6, 页码: 563-603
作者:  Schuettpelz, Eric;  Schneider, Harald;  Smith, Alan R.;  Hovenkamp, Peter;  Prado, Jefferson;  Rouhan, Germinal;  Salino, Alexandre;  Sundue, Michael;  Almeida, Thais Elias;  Parris, Barbara;  Sessa, Emily B.;  Field, Ashley R.;  de Gasper, Andre Luis;  Rothfels, Carl J.;  Windham, Michael D.;  Lehnert, Marcus;  Dauphin, Benjamin;  Ebihara, Atsushi;  Lehtonen, Samuli;  Schwartsburd, Pedro Bond;  Metzgar, Jordan;  Zhang, Li-Bing;  Kuo, Li-Yaung;  Brownsey, Patrick J.;  Kato, Masahiro;  Arana, Marcelo Daniel;  Assis, Francine C.;  Barker, Michael S.;  Barrington, David S.;  Chang, Ho-Ming;  Chang, Yi-Han;  Chao, Yi-Shan;  Chen, Cheng-Wei;  Chen, De-Kui;  Chiou, Wen-Liang;  Dittrich, Vinicius Antonio de Oliveira;  Duan, Yi-Fan;  Dubuisson, Jean-Yves;  Farrar, Donald R.;  Fawcett, Susan;  Gabriel y Galan, Jose Maria;  Goes-Neto, Luiz Armando de Araujo;  Grant, Jason R.;  Grusz, Amanda L.;  Haufler, Christopher;  Hauk, Warren;  He, Hai;  Hennequin, Sabine;  Hirai, Regina Yoshie;  Huiet, Layne;  Kessler, Michael;  Korall, Petra;  Labiak, Paulo H.;  Larsson, Anders;  Leon, Blanca;  Li, Chun-Xiang;  Li, Fay-Wei;  Link-Perez, Melanie;  Liu, Hong-Mei;  Ngan Thi Lu;  Meza-Torres, Esteban I.;  Miao, Xin-Yuan;  Moran, Robbin;  Mynssen, Claudine Massi;  Nagalingum, Nathalie;  Ollgaard, Benjamin;  Paul, Alison M.;  Pereira, Jovani B. de S.;  Perrie, Leon R.;  Ponce, Monica;  Ranker, Tom A.;  Schulz, Christian;  Shinohara, Wataru;  Shmakov, Alexander;  Sigel, Erin M.;  de Souza, Filipe Soares;  Sylvestre, Lana da Silva;  Testo, Weston;  Triana-Moreno, Luz Amparo;  Tsutsumi, Chie;  Tuomisto, Hanna;  Valdespino, Ivan A.;  Vasco, Alejandra;  Viveros, Raquel Stauffer;  Weakley, Alan;  Wei, Ran;  Weststrand, Stina;  Wolf, Paul G.;  Yatskievych, George;  Xu, Xiao-Gang;  Yan, Yue-Hong;  Zhang, Liang;  Zhang, Xian-Chun;  Zhou, Xin-Mao
Adobe PDF(687Kb)  |  收藏  |  浏览/下载：353/0  |  提交时间：2022/07/08
classification  ferns  lycophytes  monophyly  phylogeny  pteridophytes