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The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 2, 页码: 336-350
Authors:  Liu, Jin;  Shi, Cong;  Shi, Cheng-Cheng;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Li, Kui;  Lu, Hui-Fang;  Shi, Chao;  Zhu, Si-Tao;  Xiao, Zai-Yun;  Nan, Hong;  Yue, Yao;  Zhu, Xun-Ge;  Wu, Yu;  Hong, Xiao-Ning;  Fan, Guang-Yi;  Tong, Yan;  Zhang, Dan;  Mao, Chang-Li;  Liu, Yun-Long;  Hao, Shi-Jie;  Liu, Wei-Qing;  Lv, Mei-Qi;  Zhang, Hai-Bin;  Liu, Yuan;  Hu-tang, Ge-Ran;  Wang, Jin-Peng;  Wang, Jia-Hao;  Sun, Ying-Huai;  Ni, Shu-Bang;  Chen, Wen-Bin;  Zhang, Xing-Cai;  Jiao, Yuan-Nian;  Eichler, Evan E.;  Li, Guo-Hua;  Liu, Xin;  Gao, Li-Zhi
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rubber tree  rubber biosynthesis  chromosome evolution  whole-genome duplication  domestication  
The flattened and needlelike leaves of the pine family (Pinaceae) share a conserved genetic network for adaxial-abaxial polarity but have diverged for photosynthetic adaptation 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2020, 卷号: 20, 期号: 1
Authors:  Du, Hong;  Ran, Jin-Hua;  Feng, Yuan-Yuan;  Wang, Xiao-Quan
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Pinaceae  Leaf anatomy  Adaxial-abaxial polarity  Polarity gene  Developmental mechanism  Adaptive evolution  Photosynthesis  
The complete mitochondrial genome of Taxus cuspidata (Taxaceae): eight protein-coding genes have transferred to the nuclear genome 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2020, 卷号: 20, 期号: 1
Authors:  Kan, Sheng-Long;  Shen, Ting-Ting;  Gong, Ping;  Ran, Jin-Hua;  Wang, Xiao-Quan
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Taxus cuspidata  Mitogenome  Endosymbiotic gene transfer  RNA editing  Gymnosperms  
Phylotranscriptomics resolves interspecific relationships and indicates multiple historical out-of-North America dispersals through the Bering Land Bridge for the genus Picea (Pinaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 141
Authors:  Shao, Cheng-Cheng;  Shen, Ting-Ting;  Jin, Wei-Tao;  Mao, Han-Jie;  Ran, Jin-Hua;  Wang, Xiao-Quan
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Picea  Phylogenomics  Molecular phylogeny  Biogeography  Bering Land Bridge  Japanese Archipelago  
Phylogenomics disentangles the evolutionary history of spruces (Picea) in the Qinghai-Tibetan Plateau: Implications for the design of population genetic studies and species delimitation of conifers 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 141
Authors:  Shen, Ting-Ting;  Ran, Jin-Hua;  Wang, Xiao-Quan
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Phylotranscriptomics  Recent radiation  Hybrid origin  Speciation  Qinghai-Tibetan Plateau  Picea  
Phylogenomics resolves the deep phylogeny of seed plants and indicates partial convergent or homoplastic evolution between Gnetales and angiosperms 期刊论文
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2018, 卷号: 285, 期号: 1881
Authors:  Ran, Jin-Hua;  Shen, Ting-Ting;  Wang, Ming-Ming;  Wang, Xiao-Quan
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seed plants  gymnosperms  Gnepine hypothesis  phylotranscriptomics  phylogeny  homoplasy  
Phylogeny and evolutionary history of Pinaceae updated by transcriptomic analysis 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2018, 卷号: 129, 页码: 106-116
Authors:  Ran, Jin-Hua;  Shen, Ting-Ting;  Wu, Hui;  Gong, Xun;  Wang, Xiao-Quan
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Phylogenomics  Divergence times  Convergence  Cathaya  Cedrus  Pinaceae  
A genome for gnetophytes and early evolution of seed plants 期刊论文
NATURE PLANTS, 2018, 卷号: 4, 期号: 2, 页码: 82-89
Authors:  Wan, Tao;  Liu, Zhi-Ming;  Li, Ling-Fei;  Leitch, Andrew R.;  Leitch, Ilia J.;  Lohaus, Rolf;  Liu, Zhong-Jian;  Xin, Hai-Ping;  Gong, Yan-Bing;  Liu, Yang;  Wang, Wen-Cai;  Chen, Ling-Yun;  Yang, Yong;  Kelly, Laura J.;  Yang, Ji;  Huang, Jin-Ling;  Li, Zhen;  Liu, Ping;  Zhang, Li;  Liu, Hong-Mei;  Wang, Hui;  Deng, Shu-Han;  Liu, Meng;  Li, Ji;  Ma, Lu;  Liu, Yan;  Lei, Yang;  Xu, Wei;  Wu, Ling-Qing;  Liu, Fan;  Ma, Qian;  Yu, Xin-Ran;  Jiang, Zhi;  Zhang, Guo-Qiang;  Li, Shao-Hua;  Li, Rui-Qiang;  Zhang, Shou-Zhou;  Wang, Qing-Feng;  Van de Peer, Yves;  Zhang, Jin-Bo;  Wang, Xiao-Ming
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Tree of life for the genera of Chinese vascular plants 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 4, 页码: 277-306
Authors:  Chen, Zhi-Duan;  Yang, Tuo;  Lin, Li;  Lu, Li-Min;  Li, Hong-Lei;  Sun, Miao;  Liu, Bing;  Chen, Min;  Niu, Yan-Ting;  Ye, Jian-Fei;  Cao, Zhi-Yong;  Liu, Hong-Mei;  Wang, Xiao-Ming;  Wang, Wei;  Zhang, Jing-Bo;  Meng, Zhen;  Cao, Wei;  Li, Jian-Hui;  Wu, Sheng-Dan;  Zhao, Hui-Ling;  Liu, Zhong-Jian;  Du, Zhi-Yuan;  Wang, Qing-Feng;  Guo, Jing;  Tan, Xin-Xin;  Su, Jun-Xia;  Zhang, Lin-Jing;  Yang, Lei-Lei;  Liao, Yi-Ying;  Li, Ming-He;  Zhang, Guo-Qiang;  Chung, Shih-Wen;  Zhang, Jian;  Xiang, Kun-Li;  Li, Rui-Qi;  Soltis, Douglas E.;  Soltis, Pamela S.;  Zhou, Shi-Liang;  Ran, Jin-Hua;  Wang, Xiao-Quan;  Jin, Xiao-Hua;  Chen, You-Sheng;  Gao, Tian-Gang;  Li, Jian-Hua;  Zhang, Shou-Zhou;  Lu, An-Ming
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China  DarwinTree  megaphylogeny  regional tree of life  SoTree  vascular plants  
Evolutionary patterns of genic DNA methylation vary across land plants 期刊论文
NATURE PLANTS, 2016, 卷号: 2, 期号: 2
Authors:  Takuno, Shohei;  Ran, Jin-Hua;  Gaut, Brandon S.
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