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Coexpression network revealing the plasticity and robustness of population transcriptome during the initial stage of domesticating energy crop Miscanthus lutarioriparius 期刊论文
PLANT MOLECULAR BIOLOGY, 2018, 卷号: 97, 期号: 6, 页码: 489-506
Authors:  Xing, Shilai;  Tao, Chengcheng;  Song, Zhihong;  Liu, Wei;  Yan, Juan;  Kang, Lifang;  Lin, Cong;  Sang, Tao
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Miscanthus lutarioriparius  Gene coexpression network  Expression variation  Genetic diversity  Acclimation  
Population transcriptomic characterization of the genetic and expression variation of a candidate progenitor of Miscanthus energy crops 期刊论文
MOLECULAR ECOLOGY, 2017, 卷号: 26, 期号: 21, 页码: 5911-5922
Authors:  Yan, Juan;  Song, Zhihong;  Xu, Qin;  Kang, Lifang;  Zhu, Caiyun;  Xing, Shilai;  Liu, Wei;  Greimler, Josef;  Zuest, Tobias;  Li, Jianqiang;  Sang, Tao
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gene expression  Miscanthus  nucleotide diversity  population genetics  transcriptome  
Transcriptomic characterization of candidate genes responsive to salt tolerance of Miscanthus energy crops 期刊论文
GLOBAL CHANGE BIOLOGY BIOENERGY, 2017, 卷号: 9, 期号: 7, 页码: 1222-1237
Authors:  Song, Zhihong;  Xu, Qin;  Lin, Cong;  Tao, Chengcheng;  Zhu, Caiyun;  Xing, Shilai;  Fan, Yangyang;  Liu, Wei;  Yan, Juan;  Li, Jianqiang;  Sang, Tao
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bioenergy  energy crop domestication  long-term salt tolerance  marginal land  Miscanthus lutarioriparius  resource allocation  
Genome-Wide Analysis Indicates Lineage-Specific Gene Loss during Papilionoideae Evolution 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2016, 卷号: 8, 期号: 3, 页码: 635-648
Authors:  Gu, Yongzhe;  Xing, Shilai;  He, Chaoying
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defense response  gene loss  genome evolution  legume  nitrogen fixation  
Population transcriptomics uncovers the regulation of gene expression variation in adaptation to changing environment 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6
Authors:  Xu, Qin;  Zhu, Caiyun;  Fan, Yangyang;  Song, Zhihong;  Xing, Shilai;  Liu, Wei;  Yan, Juan;  Sang, Tao
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The Coordination of Gene Expression within Photosynthesis Pathway for Acclimation of C-4 Energy Crop Miscanthus lutarioriparius 期刊论文
FRONTIERS IN PLANT SCIENCE, 2016, 卷号: 7
Authors:  Xing, Shilai;  Kang, Lifang;  Xu, Qin;  Fan, Yangyang;  Liu, Wei;  Zhu, Caiyun;  Song, Zhihong;  Wang, Qian;  Yan, Juan;  Li, Jianqiang;  Sang, Tao
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C-4 photosynthesis  acclimation  expression coordination  cyclic electron transport  water use efficiency  
Population transcriptomics reveals a potentially positive role of expression diversity in adaptation 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2015, 卷号: 57, 期号: 3, 页码: 284-299
Authors:  Xu, Qin;  Xing, Shilai;  Zhu, Caiyun;  Liu, Wei;  Fan, Yangyang;  Wang, Qian;  Song, Zhihong;  Yang, Wenhui;  Luo, Fan;  Shang, Fei;  Kang, Lifang;  Chen, Wenli;  Yan, Juan;  Li, Jianqiang;  Sang, Tao
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Adaptation  artificial selection  de novo assembling  expression variation  genetic diversity  Miscanthus lutarioriparius  population transcriptome  
Transcriptome-wide characterization of candidate genes for improving the water use efficiency of energy crops grown on semiarid land 期刊论文
JOURNAL OF EXPERIMENTAL BOTANY, 2015, 卷号: 66, 期号: 20, 页码: 6415-6429
Authors:  Fan, Yangyang;  Wang, Qian;  Kang, Lifang;  Liu, Wei;  Xu, Qin;  Xing, Shilai;  Tao, Chengcheng;  Song, Zhihong;  Zhu, Caiyun;  Lin, Cong;  Yan, Juan;  Li, Jianqiang;  Sang, Tao
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Abiotic stress  adaptation  genetic and environmental interaction  Miscanthus lutarioriparius  RNA-Seq  water use efficiency