The complete chloroplast genome sequence of Homalium cochinchinense (Salicaceae)

doi:10.1080/23802359.2018.1561235

	The complete chloroplast genome sequence of Homalium cochinchinense (Salicaceae)
	Liu, Shuyu ; Tian, Yang ; Hu, Yiheng 1; Li, Yi ; Zhang, Xiaoyan ; Li, Jinhua 2; Wang, Zhaoshan
	2019
发表期刊	MITOCHONDRIAL DNA PART B-RESOURCES
ISSN	2380-2359
卷号	4 期号:1 页码:654-655
摘要	The complete chloroplast genome sequence of Homalium cochinchinense was characterized from Illumina pair-end sequencing. The chloroplast genome of H .cochinchinense was 157,116 bp in length, containing a large single-copy region (LSC) of 85,194 bp, a small single-copy region (SSC) of 16,650 bp, and two inverted repeat (IR) regions of 27,636 bp. The overall GC content is 36.6%, while the corresponding values of the LSC, SSC, and IR regions are 64.9%, 69.2%, and 60.3%, respectively. The genome contains 122 complete genes, including 86 protein-coding genes (77 protein-coding gene species), 36 tRNA genes (29 tRNA species) and 8 rRNA genes(4 rRNA species). The Neighbour-joining phylogenetic analysis showed that H. cochinchinense and Flacourtia indica clustered together as sisters to other Salicaceae species, and suggested that this clade may be an ancestral lineage as observed in the phylogenetic tree.
关键词	Homalium cochinchinense complete chloroplast genome phylogenetic analysis
学科领域	Genetics & Heredity
DOI	10.1080/23802359.2018.1561235
收录类别	SCI
语种	英语
WOS研究方向	Genetics & Heredity
WOS记录号	WOS:000456745400001
出版者	TAYLOR & FRANCIS LTD
文献子类	Article
出版地	ABINGDON
资助机构	Fundamental Research Funds of Chinese Academy of Forestry [CAFYBB2017ZX001-1] ; National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [31470665]
作者邮箱	lijinh@caf.ac.cn ; w@caf.ac.cn
作品OA属性	gold
引用统计	被引频次：2[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.ibcas.ac.cn/handle/2S10CLM1/19465
专题	系统与进化植物学国家重点实验室
作者单位	1.Chinese Acad Forestry, Res Inst Forestry, State Key Lab Tree Genet & Breeding, Key Lab Silviculture State Forestry Adm, Beijing 100091, Peoples R China 2.Chinese Acad Sci, State Key Lab Systemat & Evolutionary Bot, Inst Bot, Beijing, Peoples R China 3.Chinese Acad Forestry, Res Inst Forestry, State Key Lab Tree Genet & Breeding, Beijing 100091, Peoples R China
推荐引用方式 GB/T 7714	Liu, Shuyu,Tian, Yang,Hu, Yiheng,et al. The complete chloroplast genome sequence of Homalium cochinchinense (Salicaceae)[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2019,4(1):654-655.
APA	Liu, Shuyu.,Tian, Yang.,Hu, Yiheng.,Li, Yi.,Zhang, Xiaoyan.,...&Wang, Zhaoshan.(2019).The complete chloroplast genome sequence of Homalium cochinchinense (Salicaceae).MITOCHONDRIAL DNA PART B-RESOURCES,4(1),654-655.
MLA	Liu, Shuyu,et al."The complete chloroplast genome sequence of Homalium cochinchinense (Salicaceae)".MITOCHONDRIAL DNA PART B-RESOURCES 4.1(2019):654-655.

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