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Phylogeography of the widespread fern Lemmaphyllum in East Asia: species differentiation and population dynamics in response to change in climate and geography 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 2, 页码: 411-432
作者:  Wei, Xue-Ping;  Zhang, Xian-Chun
Adobe PDF(2355Kb)  |  收藏  |  浏览/下载:15/0  |  提交时间:2024/03/07
genetic structure  glacial refuge  phylogeny  Polypodiaceae  Quaternary climatic oscillations  speciation  
The associated evolution among the extensive RNA editing, GC-biased mutation, and PPR family expansion in the organelle genomes of Selaginellaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022
作者:  Kang, Jong-Soo;  Yu, Jigao;  Zhang, Xian-Chun;  Xiang, Qiao-Ping
Adobe PDF(1627Kb)  |  收藏  |  浏览/下载:14/0  |  提交时间:2024/03/07
GC-biased mutation  mitochondrial genome (mitogenome)  pentatricopeptide repeat (PPR) protein  plastid genome (plastome)  RNA editing  Selaginellaceae  
Genome size evolution of the extant lycophytes and ferns 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 2, 页码: 141-152
作者:  Wang, Fa-Guo;  Wang, Ai-Hua;  Bai, Cheng-Ke;  Jin, Dong-Mei;  Nie, Li-Yun;  Harris, A. J.;  Che, Le;  Wang, Juan-Juan;  Li, Shi-Yu;  Xu, Lei;  Shen, Hui;  Gu, Yu-Feng;  Shang, Hui;  Duan, Lei;  Zhang, Xian-Chun;  Chen, Hong-Feng;  Yan, Yue-Hong
Adobe PDF(2515Kb)  |  收藏  |  浏览/下载:20/0  |  提交时间:2024/03/07
Genome size  Ferns  Chromosome numbers  Habitat type  Whole-genome duplications  Evolution  
Ecological adaptation shaped the genetic structure of homoploid ferns against strong dispersal capacity 期刊论文
MOLECULAR ECOLOGY, 2022, 卷号: 31, 期号: 9, 页码: 2679-2697
作者:  Liang, Si-Qi;  Zhang, Xian-Chun;  Wei, Ran
Adobe PDF(1701Kb)  |  收藏  |  浏览/下载:20/0  |  提交时间:2024/03/07
dispersal  gene flow  homoploid  homosporous ferns  local adaptation  RAD-seq  
The evolution of extremely diverged plastomes in Selaginellaceae (lycophyte) is driven by repeat patterns and the underlying DNA maintenance machinery 期刊论文
PLANT JOURNAL, 2022, 卷号: 111, 期号: 3, 页码: 768-784
作者:  Xiang, Qiao-Ping;  Tang, Jun-Yong;  Yu, Ji-Gao;  Smith, David Roy;  Zhu, Yan-Mei;  Wang, Ya-Rong;  Kang, Jong-Soo;  Yang, Jie;  Zhang, Xian-Chun
Adobe PDF(1628Kb)  |  收藏  |  浏览/下载:19/0  |  提交时间:2024/03/07
Selaginella sinensis  network plastome  perfect repeats  dynamic mitogenome  GC content  RNA editing  
Plastid phylogenomics provides novel insights into the infrafamilial relationship of Polypodiaceae 期刊论文
CLADISTICS, 2021, 卷号: 37, 期号: 6, 页码: 717-727
作者:  Wei, Ran;  Yang, Jie;  He, Li-Juan;  Liu, Hong-Mei;  Hu, Jia-Yu;  Liang, Si-Qi;  Wei, Xue-Ping;  Zhao, Cun-Feng;  Zhang, Xian-Chun
Adobe PDF(476Kb)  |  收藏  |  浏览/下载:83/0  |  提交时间:2023/02/24
The origin of allotetraploid Lepisorus inaequibasis (Polypodiaceae) and paternal bias in its morphology and abiotic niche 期刊论文
TAXON, 2020, 卷号: 69, 期号: 1, 页码: 43-55
作者:  Zhao, Cun-Feng;  Wei, Ran;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(7102Kb)  |  收藏  |  浏览/下载:112/0  |  提交时间:2022/03/01
hybrid origin  paternal preference  polyploid  reticulate evolution  
Distinctive evolutionary pattern of organelle genomes linked to the nuclear genome in Selaginellaceae 期刊论文
PLANT JOURNAL, 2020, 卷号: 104, 期号: 6, 页码: 1657-1672
作者:  Kang, Jong-Soo;  Zhang, Hong-Rui;  Wang, Ya-Rong;  Liang, Si-Qi;  Mao, Zhi-Yuan;  Zhang, Xian-Chun;  Xiang, Qiao-Ping
Adobe PDF(1546Kb)  |  收藏  |  浏览/下载:128/0  |  提交时间:2022/03/01
Selaginella  plastid genome  mitochondrial genome  genome evolution  convergent evolution  RecA  
Directed Repeats Co-occur with Few Short-Dispersed Repeats in Plastid Genome of a Spikemoss, Selaginella vardei (Selaginellaceae, Lycopodiopsida) 期刊论文
BMC GENOMICS, 2019, 卷号: 20
作者:  Zhang, Hong-Rui;  Zhang, Xian-Chun;  Xiang, Qiao-Ping
Adobe PDF(1747Kb)  |  收藏  |  浏览/下载:90/0  |  提交时间:2022/01/06
direct repeat  inversion  inverted repeat  plastome evolution  short dispersed repeats  
The Unique Evolutionary Trajectory and Dynamic Conformations of DR and IR/DR-Coexisting Plastomes of the Early Vascular Plant Selaginellaceae (Lycophyte) 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2019, 卷号: 11, 期号: 4, 页码: 1258-1274
作者:  Zhang, Hong-Rui;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(1212Kb)  |  收藏  |  浏览/下载:94/0  |  提交时间:2022/01/06
gene loss  homologous recombination  DR/IR evolution  Selaginella  substitution rate  time divergence