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Integrated phylogenomic analyses unveil reticulate evolution in Parthenocissus (Vitaceae), highlighting speciation dynamics in the Himalayan-Hengduan Mountains
期刊论文
NEW PHYTOLOGIST, 2023, 卷号: 238, 期号: 2, 页码: 888-903
Authors:
Yu, Jinren
;
Niu, Yanting
;
You, Yichen
;
Cox, Cymon J.
;
Barrett, Russell L.
;
Trias-Blasi, Anna
;
Guo, Jing
;
Wen, Jun
;
Lu, Limin
;
Chen, Zhiduan
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Submit date:2024/03/07
biogeography
comprehensive approach
Himalayan-Hengduan Mountains region
Parthenocissus
phylogenetic discordance
reticulation
speciation reversal
Phylogeny and evolution of Cupressaceae: Updates on intergeneric relationships and new insights on ancient intergeneric hybridization
期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 177
Authors:
Liu, Xin-Quan
;
Xia, Xiao-Mei
;
Chen, Luo
;
Wang, Xiao-Quan
Adobe PDF(4155Kb)
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Submit date:2024/03/07
Phylogenomics
Biogeography
Reticulate evolution
Ancient hybridization
Cupressaceae
Conifer
Phylogenomic Analysis Reconstructed the Order Matoniales from Paleopolyploidy Veil
期刊论文
PLANTS-BASEL, 2022, 卷号: 11, 期号: 12
Authors:
Shu, Jiang-Ping
;
Wang, Hao
;
Shen, Hui
;
Wang, Rui-Jiang
;
Fu, Qiang
;
Wang, Yong-Dong
;
Jiao, Yuan-Nian
;
Yan, Yue-Hong
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ancient polyploidization
ancient radiation
reticulate evolution
mass extinction
ferns
phylogeny
1-to-1 orthologous genes
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere
期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
Authors:
Liu, Bin-Bin
;
Ren, Chen
;
Kwak, Myounghai
;
Hodel, Richard G. J.
;
Xu, Chao
;
He, Jian
;
Zhou, Wen-Bin
;
Huang, Chien-Hsun
;
Ma, Hong
;
Qian, Guan-Ze
;
Hong, De-Yuan
;
Wen, Jun
Adobe PDF(3053Kb)
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Submit date:2024/03/07
deep genome skimming
genomic discordance
historical biogeography
massive extinction
reticulate evolution
single-copy nuclear genes
Phylogeny and taxonomy of Cinnamomum (Lauraceae)
期刊论文
ECOLOGY AND EVOLUTION, 2022, 卷号: 12, 期号: 10
Authors:
Yang, Zhi
;
Liu, Bing
;
Yang, Yong
;
Ferguson, David K.
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Camphora
Cinnamomum
Lauraceae
new combinations
phylogeny
taxonomy
Synthesis of Nuclear and Chloroplast Data Combined With Network Analyses Supports the Polyploid Origin of the Apple Tribe and the Hybrid Origin of the Maleae-Gillenieae Clade
期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12
Authors:
Hodel, Richard G. J.
;
Zimmer, Elizabeth A.
;
Liu, Bin-Bin
;
Wen, Jun
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allopolyploidy
ancient hybridization
cytonuclear conflict
genome doubling
phylogenetic networks
phylogenomics
reticulate evolution
Out of the Pan-Himalaya: Evolutionary history of the Paeoniaceae revealed by phylogenomics
期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1170-1182
Authors:
Zhou, Shi-Liang
;
Xu, Chao
;
Liu, Jing
;
Yu, Yan
;
Wu, Ping
;
Cheng, Tao
;
Hong, De-Yuan
Adobe PDF(1288Kb)
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Submit date:2023/02/24
biogeography
molecular dating
Paeonia
phylogeny
reticulate evolution
Leaf epidermal micromorphology defining the clades in Cinnamomum (Lauraceae)
期刊论文
PHYTOKEYS, 2021, 期号: 182, 页码: 125-148
Authors:
Gang, Zeng
;
Liu, Bing
;
Rohwer, Jens G.
;
Ferguson, David Kay
;
Yang, Yong
Adobe PDF(8286Kb)
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Submit date:2023/02/24
Anatomy
Cinnamomum
Lauraceae
scanning electron microscope (SEM)
systematics
Rehmannieae or Rehmanniaceae? Evidence from plastome sequences and floral morphology
期刊论文
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2021, 卷号: 196, 期号: 2, 页码: 145-162
Authors:
Xia, Zhi
;
Li, Cui-Cui
;
Wen, Jun
;
Wang, Yin-Zheng
Adobe PDF(4375Kb)
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Submit date:2023/02/24
floral development
Lamiales
Orobanchaceae
plastid genome
Rehmannia
Triaenophora
Phylotranscriptomics reveals the complex evolutionary and biogeographic history of the genus Tsuga with an East Asian-North American disjunct distribution
期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2021, 卷号: 157
Authors:
Feng, Yuan-Yuan
;
Shen, Ting-Ting
;
Shao, Cheng-Cheng
;
Du, Hong
;
Ran, Jin-Hua
;
Wang, Xiao-Quan
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Submit date:2023/02/24
Tsuga
Phylotranscriptomics
Biogeography
Disjunct distribution
Bering Land Bridge
Hybrid origin