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Integrated phylogenomic analyses unveil reticulate evolution in Parthenocissus (Vitaceae), highlighting speciation dynamics in the Himalayan-Hengduan Mountains 期刊论文
NEW PHYTOLOGIST, 2023, 卷号: 238, 期号: 2, 页码: 888-903
Authors:  Yu, Jinren;  Niu, Yanting;  You, Yichen;  Cox, Cymon J.;  Barrett, Russell L.;  Trias-Blasi, Anna;  Guo, Jing;  Wen, Jun;  Lu, Limin;  Chen, Zhiduan
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biogeography  comprehensive approach  Himalayan-Hengduan Mountains region  Parthenocissus  phylogenetic discordance  reticulation  speciation reversal  
Phylogeny and evolution of Cupressaceae: Updates on intergeneric relationships and new insights on ancient intergeneric hybridization 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 177
Authors:  Liu, Xin-Quan;  Xia, Xiao-Mei;  Chen, Luo;  Wang, Xiao-Quan
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Phylogenomics  Biogeography  Reticulate evolution  Ancient hybridization  Cupressaceae  Conifer  
Phylogenomic Analysis Reconstructed the Order Matoniales from Paleopolyploidy Veil 期刊论文
PLANTS-BASEL, 2022, 卷号: 11, 期号: 12
Authors:  Shu, Jiang-Ping;  Wang, Hao;  Shen, Hui;  Wang, Rui-Jiang;  Fu, Qiang;  Wang, Yong-Dong;  Jiao, Yuan-Nian;  Yan, Yue-Hong
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ancient polyploidization  ancient radiation  reticulate evolution  mass extinction  ferns  phylogeny  1-to-1 orthologous genes  
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
Authors:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
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deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Phylogeny and taxonomy of Cinnamomum (Lauraceae) 期刊论文
ECOLOGY AND EVOLUTION, 2022, 卷号: 12, 期号: 10
Authors:  Yang, Zhi;  Liu, Bing;  Yang, Yong;  Ferguson, David K.
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Camphora  Cinnamomum  Lauraceae  new combinations  phylogeny  taxonomy  
Synthesis of Nuclear and Chloroplast Data Combined With Network Analyses Supports the Polyploid Origin of the Apple Tribe and the Hybrid Origin of the Maleae-Gillenieae Clade 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12
Authors:  Hodel, Richard G. J.;  Zimmer, Elizabeth A.;  Liu, Bin-Bin;  Wen, Jun
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allopolyploidy  ancient hybridization  cytonuclear conflict  genome doubling  phylogenetic networks  phylogenomics  reticulate evolution  
Out of the Pan-Himalaya: Evolutionary history of the Paeoniaceae revealed by phylogenomics 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1170-1182
Authors:  Zhou, Shi-Liang;  Xu, Chao;  Liu, Jing;  Yu, Yan;  Wu, Ping;  Cheng, Tao;  Hong, De-Yuan
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biogeography  molecular dating  Paeonia  phylogeny  reticulate evolution  
Leaf epidermal micromorphology defining the clades in Cinnamomum (Lauraceae) 期刊论文
PHYTOKEYS, 2021, 期号: 182, 页码: 125-148
Authors:  Gang, Zeng;  Liu, Bing;  Rohwer, Jens G.;  Ferguson, David Kay;  Yang, Yong
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Anatomy  Cinnamomum  Lauraceae  scanning electron microscope (SEM)  systematics  
Rehmannieae or Rehmanniaceae? Evidence from plastome sequences and floral morphology 期刊论文
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2021, 卷号: 196, 期号: 2, 页码: 145-162
Authors:  Xia, Zhi;  Li, Cui-Cui;  Wen, Jun;  Wang, Yin-Zheng
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floral development  Lamiales  Orobanchaceae  plastid genome  Rehmannia  Triaenophora  
Phylotranscriptomics reveals the complex evolutionary and biogeographic history of the genus Tsuga with an East Asian-North American disjunct distribution 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2021, 卷号: 157
Authors:  Feng, Yuan-Yuan;  Shen, Ting-Ting;  Shao, Cheng-Cheng;  Du, Hong;  Ran, Jin-Hua;  Wang, Xiao-Quan
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Tsuga  Phylotranscriptomics  Biogeography  Disjunct distribution  Bering Land Bridge  Hybrid origin