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Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023, 卷号: 61, 期号: 1, 页码: 22-41
作者:  Duan, Lei;  Han, Li-Na;  Liu, Bin-Bin;  Leostrin, Artem;  Harris, A. J.;  Wang, Lin;  Arslan, Emine;  Ertugrul, Kuddisi;  Knyazev, Mikhail;  Hantemirova, Elena;  Wen, Jun;  Chen, Hong-Feng
Adobe PDF(1597Kb)  |  收藏  |  浏览/下载：61/0  |  提交时间：2024/03/07
character evolution  Glycyrrhiza  machine learning analysis  medicinal group  phylogenomics  species delimitation  
Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1
作者:  Dong, Wenpan;  Li, Enze;  Liu, Yanlei;  Xu, Chao;  Wang, Yushuang;  Liu, Kangjia;  Cui, Xingyong;  Sun, Jiahui;  Suo, Zhili;  Zhang, Zhixiang;  Wen, Jun;  Zhou, Shiliang
Adobe PDF(4457Kb)  |  收藏  |  浏览/下载：18/0  |  提交时间：2024/03/07
Ancient introgression  Gene tree conflict  Incomplete lineage sorting  Oleaceae  Phylogenomics  Rate heterogeneity  
Capturing single-copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in Vitaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 5, 页码: 1124-1138
作者:  Liu, Bin-Bin;  Ma, Zhi-Yao;  Ren, Chen;  Hodel, Richard G. J.;  Sun, Miao;  Liu, Xiu-Qun;  Liu, Guang-Ning;  Hong, De-Yuan;  Zimmer, Elizabeth A.;  Wen, Jun
Adobe PDF(2650Kb)  |  收藏  |  浏览/下载：73/0  |  提交时间：2023/02/24
deep genome skimming  Hyb-Seq  mitochondrial genes  nuclear ribosomal DNA  single-copy nuclear genes  Vitaceae  
An updated phylogenetic and biogeographic analysis based on genome skimming data reveals convergent evolution of shrubby habit in Clematis in the Pliocene and Pleistocene 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2021, 卷号: 164
作者:  He, Jian;  Lyu, Rudan;  Luo, Yike;  Lin, Lele;  Yao, Min;  Xiao, Jiamin;  Xie, Lei;  Wen, Jun;  Pei, Linying;  Yan, Shuangxi;  Cheng, Jin;  Li, Jinyu;  Li, Liangqian
Adobe PDF(9248Kb)  |  收藏  |  浏览/下载：98/0  |  提交时间：2023/02/24
Clematissect  Fruticella  Convergent evolution  Genome skimming  nrDNA  Plastid genome  Phylogeny  
Molecular phylogeny and species delimitation of Stachyuraceae: Advocating a herbarium specimen-based phylogenomic approach in resolving species boundaries 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020, 卷号: 58, 期号: 5, 页码: 710-724
作者:  Su, Jun-Xia;  Dong, Cong-Cong;  Niu, Yan-Ting;  Lu, Li-Min;  Xu, Chao;  Liu, Bing;  Zhou, Shi-Liang;  Lu, An-Ming;  Zhu, Yu-Ping;  Wen, Jun;  Chen, Zhi-Duan
Adobe PDF(1772Kb)  |  收藏  |  浏览/下载：114/0  |  提交时间：2022/03/01
chloroplast genome  DNA reconstruction  phylogeny  specimen-based taxon sampling  Stachyuraceae  
Phylogenetic relationships and chloroplast capture in the Amelanchier-Malacomeles-Peraphyllum clade (Maleae, Rosaceae): Evidence from chloroplast genome and nuclear ribosomal DNA data using genome skimming 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2020, 卷号: 147
作者:  Liu, Bin-Bin;  Campbell, Christopher S.;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(2972Kb)  |  收藏  |  浏览/下载：114/0  |  提交时间：2022/03/01
Chloroplast capture  Hybridization  Maleae  Nuclear ribosomal DNA  Plastome  Rosaceae  
Eriobotrya Belongs to Rhaphiolepis (Maleae, Rosaceae): Evidence From Chloroplast Genome and Nuclear Ribosomal DNA Data 期刊论文
FRONTIERS IN PLANT SCIENCE, 2020, 卷号: 10
作者:  Liu, Bin-Bin;  Liu, Guang-Ning;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(2906Kb)  |  收藏  |  浏览/下载：99/0  |  提交时间：2022/03/01
chloroplast genome  Eriobotrya  hybridization  Maleae  nrDNA  Rhaphiolepis  Rosaceae  
Phylogenomic analyses of the Photinia complex support the recognition of a new genus Phippsiomeles and the resurrection of a redefined Stranvaesia in Maleae (Rosaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 卷号: 57, 期号: 6, 页码: 678-694
作者:  Liu, Bin-Bin;  Hong, De-Yuan;  Zhou, Shi-Liang;  Xu, Chao;  Dong, Wen-Pan;  Johnson, Gabriel;  Wen, Jun
Adobe PDF(1734Kb)  |  收藏  |  浏览/下载：118/0  |  提交时间：2022/01/06
genome skimming  hybridization  Maleae  nrDNA  Phippsiomeles  Rosaceae  Stranvaesia  
Intercontinental and intracontinental biogeography of the eastern Asian - Eastern North American disjunct Panax (the ginseng genus, Araliaceae), emphasizing its diversification processes in eastern Asia 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2017, 卷号: 117, 页码: 60-74
作者:  Zuo, Yun-Juan;  Wen, Jun;  Zhou, Shi-Liang
Adobe PDF(2117Kb)  |  收藏  |  浏览/下载：153/0  |  提交时间：2022/03/28
Araliaceae  Biogeography  Eastern Asia  Ginseng genus  Panax  Spatial-temporal diversification