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Subgenome dominance and its evolutionary implications in crop domestication and breeding 期刊论文
HORTICULTURE RESEARCH, 2022, 卷号: 9
作者:  Wang, Zheng;  Yang, Jinghua;  Cheng, Feng;  Li, Peirong;  Xin, Xiaoyun;  Wang, Weihong;  Yu, Yangjun;  Zhang, Deshuang;  Zhao, Xiuyun;  Yu, Shuancang;  Zhang, Fenglan;  Dong, Yang;  Su, Tongbing
Adobe PDF(692Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
The associated evolution among the extensive RNA editing, GC-biased mutation, and PPR family expansion in the organelle genomes of Selaginellaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022
作者:  Kang, Jong-Soo;  Yu, Jigao;  Zhang, Xian-Chun;  Xiang, Qiao-Ping
Adobe PDF(1627Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
GC-biased mutation  mitochondrial genome (mitogenome)  pentatricopeptide repeat (PPR) protein  plastid genome (plastome)  RNA editing  Selaginellaceae  
A Comprehensive Evolutionary Study of Chloroplast RNA Editing in Gymnosperms: A Novel Type of G-to-A RNA Editing Is Common in Gymnosperms 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 卷号: 23, 期号: 18
作者:  Huang, Kai-Yuan;  Kan, Sheng-Long;  Shen, Ting-Ting;  Gong, Pin;  Feng, Yuan-Yuan;  Du, Hong;  Zhao, Yun-Peng;  Wan, Tao;  Wang, Xiao-Quan;  Ran, Jin-Hua
Adobe PDF(6332Kb)  |  收藏  |  浏览/下载：18/0  |  提交时间：2024/03/07
gymnosperms  chloroplast  RNA editing  G-to-A  GC content  
Plastid phylogenomic analyses of the Selaginella sanguinolenta group (Selaginellaceae) reveal conflict signatures resulting from sequence types, outlier genes, and pervasive RNA editing 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 173
作者:  Zhang, Meng-Hua;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(5084Kb)  |  收藏  |  浏览/下载：22/0  |  提交时间：2024/03/07
Alternative topologies  Gene-tree conflict  Plastome  Phylogenetic signal  Selaginella sanguinolenta group  Species trees  
The complete mitochondrial genome of Taxus cuspidata (Taxaceae): eight protein-coding genes have transferred to the nuclear genome 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2020, 卷号: 20, 期号: 1
作者:  Kan, Sheng-Long;  Shen, Ting-Ting;  Gong, Ping;  Ran, Jin-Hua;  Wang, Xiao-Quan
Adobe PDF(4430Kb)  |  收藏  |  浏览/下载：118/0  |  提交时间：2022/03/01
Taxus cuspidata  Mitogenome  Endosymbiotic gene transfer  RNA editing  Gymnosperms  
The hornwort genome and early land plant evolution 期刊论文
NATURE PLANTS, 2020, 卷号: 6, 期号: 2, 页码: 107-118
作者:  Zhang, Jian;  Fu, Xin-Xing;  Li, Rui-Qi;  Zhao, Xiang;  Liu, Yang;  Li, Ming-He;  Zwaenepoel, Arthur;  Ma, Hong;  Goffinet, Bernard;  Guan, Yan-Long;  Xue, Jia-Yu;  Liao, Yi-Ying;  Wang, Qing-Feng;  Wang, Qing-Hua;  Wang, Jie-Yu;  Zhang, Guo Qiang;  Wang, Zhi-Wen;  Jia, Yu;  Wang, Mei-Zhi;  Dong, Shan-Shan;  Yang, Jian-Fen;  Jiao, Yuan-Nian;  Guo, Ya-Long;  Kong, Hong-Zhi;  Lu, An-Ming;  Yang, Huan-Ming;  Zhang, Shou-Zhou;  Van de Peer, Yves;  Liu, Zhong-Jian;  Chen, Zhi-Duan
Adobe PDF(1845Kb)  |  收藏  |  浏览/下载：131/1  |  提交时间：2022/03/01
In Search of Beneficial Coding RNA Editing 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2015, 卷号: 32, 期号: 2, 页码: 536-541
作者:  Xu, Guixia;  Zhang, Jianzhi
Adobe PDF(347Kb)  |  收藏  |  浏览/下载：72/0  |  提交时间：2022/09/13
editing level  evolution  human  nonsynonymous  
Scrathpads 2.0: 互联网时代的生物多样性虚拟研究环境 期刊论文
生物多样性, 2014, 卷号: 22, 期号: 3, 页码: 264-276
作者:  王利松;  Vincent S Smith;  张红瑞;  张宪春
Adobe PDF(734Kb)  |  收藏  |  浏览/下载：153/0  |  提交时间：2018/12/05
Human coding RNA editing is generally nonadaptive 期刊论文
Proceedings of the National Academy of Sciences of the United States of America, 2014, 卷号: 111, 期号: 10, 页码: 3769–3774
作者:  Guixia Xua;  Jianzhi Zhang
Adobe PDF(1055Kb)  |  收藏  |  浏览/下载：128/0  |  提交时间：2018/12/07
Mitochondrial Phylogenomics of Early Land Plants: Mitigating the Effects of Saturation,Compositional Heterogeneity, and Codon-Usage Bias 期刊论文
SYSTEMATIC BIOLOGY, 2014, 卷号: 63, 期号: 6, 页码: 862-878
作者:  YANG LIU;  CYMONJ.COX;  WEI WANG;  BERNARD GOFFINET
Adobe PDF(2177Kb)  |  收藏  |  浏览/下载：130/0  |  提交时间：2018/12/06