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Divergence of active site motifs among different classes of Populus glutaredoxins results in substrate switches 期刊论文
PLANT JOURNAL, 2022, 卷号: 110, 期号: 1, 页码: 129-146
Authors:  Xu, Hui;  Li, Zhen;  Jiang, Peng-Fei;  Zhao, Li;  Qu, Chang;  Van de Peer, Yves;  Liu, Yan-Jing;  Zeng, Qing-Yin
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active site motif  gene family  functional divergence  glutaredoxin  enzymatic specificity  Populus trichocarpa  
Genomes shed light on the evolution of Begonia, a mega-diverse genus 期刊论文
NEW PHYTOLOGIST, 2022, 卷号: 234, 期号: 1, 页码: 295-310
Authors:  Li, Lingfei;  Chen, Xiaoli;  Fang, Dongming;  Dong, Shanshan;  Guo, Xing;  Li, Na;  Campos-Dominguez, Lucia;  Wang, Wenguang;  Liu, Yang;  Lang, Xiaoan;  Peng, Yang;  Tian, Daike;  Thomas, Daniel C.;  Mu, Weixue;  Liu, Min;  Wu, Chenyu;  Yang, Ting;  Zhang, Suzhou;  Yang, Leilei;  Yang, Jianfen;  Liu, Zhong-Jian;  Zhang, Liangsheng;  Zhang, Xingtan;  Chen, Fei;  Jiao, Yuannian;  Guo, Yalong;  Hughes, Mark;  Wang, Wei;  Liu, Xiaofei;  Zhong, Chunmei;  Li, Airong;  Sahu, Sunil Kumar;  Yang, Huanming;  Wu, Ernest;  Sharbrough, Joel;  Lisby, Michael;  Liu, Xin;  Xu, Xun;  Soltis, Douglas E.;  Van de Peer, Yves;  Kidner, Catherine;  Zhang, Shouzhou;  Liu, Huan
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Begonia  evolution  genomes  introgression  shade adaptation  whole-genome duplication  
Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 4, 页码: 773-788
Authors:  Xue, Jia-Yu;  Dong, Shan-Shan;  Wang, Ming-Qiang;  Song, Tian-Qiang;  Zhou, Guang-Can;  Li, Zhen;  Van de Peer, Yves;  Shao, Zhu-Qing;  Wang, Wei;  Chen, Min;  Zhang, Yan-Mei;  Sun, Xiao-Qin;  Chen, Hong-Feng;  Zhang, Yong-Xia;  Zhang, Shou-Zhou;  Chen, Fei;  Zhang, Liang-Sheng;  Cox, Cymon;  Liu, Yang;  Wang, Qiang;  Hang, Yue-Yu
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early angiosperm radiation  incongruence  mitochondrial genome  phylogenomics  systematic error  
The Cycas genome and the early evolution of seed plants 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 4, 页码: 389+
Authors:  Liu, Yang;  Wang, Sibo;  Li, Linzhou;  Yang, Ting;  Dong, Shanshan;  Wei, Tong;  Wu, Shengdan;  Liu, Yongbo;  Gong, Yiqing;  Feng, Xiuyan;  Ma, Jianchao;  Chang, Guanxiao;  Huang, Jinling;  Yang, Yong;  Wang, Hongli;  Liu, Min;  Xu, Yan;  Liang, Hongping;  Yu, Jin;  Cai, Yuqing;  Zhang, Zhaowu;  Fan, Yannan;  Mu, Weixue;  Sahu, Sunil Kumar;  Liu, Shuchun;  Lang, Xiaoan;  Yang, Leilei;  Li, Na;  Habib, Sadaf;  Yang, Yongqiong;  Lindstrom, Anders J.;  Liang, Pei;  Goffinet, Bernard;  Zaman, Sumaira;  Wegrzyn, Jill L.;  Li, Dexiang;  Liu, Jian;  Cui, Jie;  Sonnenschein, Eva C.;  Wang, Xiaobo;  Ruan, Jue;  Xue, Jia-Yu;  Shao, Zhu-Qing;  Song, Chi;  Fan, Guangyi;  Li, Zhen;  Zhang, Liangsheng;  Liu, Jianquan;  Liu, Zhong-Jian;  Jiao, Yuannian;  Wang, Xiao-Quan;  Wu, Hong;  Wang, Ertao;  Lisby, Michael;  Yang, Huanming;  Wang, Jian;  Liu, Xin;  Xu, Xun;  Li, Nan;  Soltis, Pamela S.;  Van de Peer, Yves;  Soltis, Douglas E.;  Gong, Xun;  Liu, Huan;  Zhang, Shouzhou
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Genomes of leafy and leafless Platanthera orchids illuminate the evolution of mycoheterotrophy 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 4, 页码: 373+
Authors:  Li, Ming-He;  Liu, Ke-Wei;  Li, Zhen;  Lu, Hsiang-Chia;  Ye, Qin-Liang;  Zhang, Diyang;  Wang, Jie-Yu;  Li, Yu-Feng;  Zhong, Zhi-Ming;  Liu, Xuedie;  Yu, Xia;  Liu, Ding-Kun;  Tu, Xiong-De;  Liu, Bin;  Hao, Yang;  Liao, Xing-Yu;  Jiang, Yu-Ting;  Sun, Wei-Hong;  Chen, Jinliao;  Chen, Yan-Qiong;  Ai, Ye;  Zhai, Jun-Wen;  Wu, Sha-Sha;  Zhou, Zhuang;  Hsiao, Yu-Yun;  Wu, Wan-Lin;  Chen, You-Yi;  Lin, Yu-Fu;  Hsu, Jui-Ling;  Li, Chia-Ying;  Wang, Zhi-Wen;  Zhao, Xiang;  Zhong, Wen-Ying;  Ma, Xiao-Kai;  Ma, Liang;  Huang, Jie;  Chen, Gui-Zhen;  Huang, Ming-Zhong;  Huang, Laiqiang;  Peng, Dong-Hui;  Luo, Yi-Bo;  Zou, Shuang-Quan;  Chen, Shi-Pin;  Lan, Siren;  Tsai, Wen-Chieh;  van de Peer, Yves;  Liu, Zhong-Jian
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The Welwitschia genome reveals a unique biology underpinning extreme longevity in deserts 期刊论文
NATURE COMMUNICATIONS, 2021, 卷号: 12, 期号: 1
Authors:  Wan, Tao;  Liu, Zhiming;  Leitch, Ilia J.;  Xin, Haiping;  Maggs-Kolling, Gillian;  Gong, Yanbing;  Li, Zhen;  Marais, Eugene;  Liao, Yiying;  Dai, Can;  Liu, Fan;  Wu, Qijia;  Song, Chi;  Zhou, Yadong;  Huang, Weichang;  Jiang, Kai;  Wang, Qi;  Yang, Yong;  Zhong, Zhixiang;  Yang, Ming;  Yan, Xue;  Hu, Guangwan;  Hou, Chen;  Su, Yingjuan;  Feng, Shixiu;  Yang, Ji;  Yan, Jijun;  Chu, Jinfang;  Chen, Fan;  Ran, Jinhua;  Wang, Xiaoquan;  Van de Peer, Yves;  Leitch, Andrew R.;  Wang, Qingfeng
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Chromosome-level genome assembly of a parent species of widely cultivated azaleas 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1
Authors:  Yang, Fu-Sheng;  Nie, Shuai;  Liu, Hui;  Shi, Tian-Le;  Tian, Xue-Chan;  Zhou, Shan-Shan;  Bao, Yu-Tao;  Jia, Kai-Hua;  Guo, Jing-Fang;  Zhao, Wei;  An, Na;  Zhang, Ren-Gang;  Yun, Quan-Zheng;  Wang, Xin-Zhu;  Mannapperuma, Chanaka;  Porth, Ilga;  El-Kassaby, Yousry Aly;  Street, Nathaniel Robert;  Wang, Xiao-Ru;  Van de Peer, Yves;  Mao, Jian-Feng
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The water lily genome and the early evolution of flowering plants 期刊论文
NATURE, 2020, 卷号: 577, 页码: 79-84
Authors:  Zhang, Liangsheng;  Chen, Fei;  Zhang, Xingtan;  Li, Zhen;  Zhao, Yiyong;  Lohaus, Rolf;  Chang, Xiaojun;  Dong, Wei;  Ho, Simon Y. W.;  Liu, Xing;  Song, Aixia;  Chen, Junhao;  Guo, Wenlei;  Wang, Zhengjia;  Zhuang, Yingyu;  Wang, Haifeng;  Chen, Xuequn;  Hu, Juan;  Liu, Yanhui;  Qin, Yuan;  Wang, Kai;  Dong, Shanshan;  Liu, Yang;  Zhang, Shouzhou;  Yu, Xianxian;  Wu, Qian;  Wang, Liangsheng;  Yan, Xueqing;  Jiao, Yuannian;  Kong, Hongzhi;  Zhou, Xiaofan;  Yu, Cuiwei;  Chen, Yuchu;  Li, Fan;  Wang, Jihua;  Chen, Wei;  Chen, Xinlu;  Jia, Qidong;  Zhang, Chi;  Jiang, Yifan;  Zhang, Wanbo;  Liu, Guanhua;  Fu, Jianyu;  Chen, Feng;  Ma, Hong;  Van de Peer, Yves;  Tang, Haibao
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The hornwort genome and early land plant evolution 期刊论文
NATURE PLANTS, 2020, 卷号: 6, 期号: 2, 页码: 107-118
Authors:  Zhang, Jian;  Fu, Xin-Xing;  Li, Rui-Qi;  Zhao, Xiang;  Liu, Yang;  Li, Ming-He;  Zwaenepoel, Arthur;  Ma, Hong;  Goffinet, Bernard;  Guan, Yan-Long;  Xue, Jia-Yu;  Liao, Yi-Ying;  Wang, Qing-Feng;  Wang, Qing-Hua;  Wang, Jie-Yu;  Zhang, Guo Qiang;  Wang, Zhi-Wen;  Jia, Yu;  Wang, Mei-Zhi;  Dong, Shan-Shan;  Yang, Jian-Fen;  Jiao, Yuan-Nian;  Guo, Ya-Long;  Kong, Hong-Zhi;  Lu, An-Ming;  Yang, Huan-Ming;  Zhang, Shou-Zhou;  Van de Peer, Yves;  Liu, Zhong-Jian;  Chen, Zhi-Duan
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A genome for gnetophytes and early evolution of seed plants 期刊论文
NATURE PLANTS, 2018, 卷号: 4, 期号: 2, 页码: 82-89
Authors:  Wan, Tao;  Liu, Zhi-Ming;  Li, Ling-Fei;  Leitch, Andrew R.;  Leitch, Ilia J.;  Lohaus, Rolf;  Liu, Zhong-Jian;  Xin, Hai-Ping;  Gong, Yan-Bing;  Liu, Yang;  Wang, Wen-Cai;  Chen, Ling-Yun;  Yang, Yong;  Kelly, Laura J.;  Yang, Ji;  Huang, Jin-Ling;  Li, Zhen;  Liu, Ping;  Zhang, Li;  Liu, Hong-Mei;  Wang, Hui;  Deng, Shu-Han;  Liu, Meng;  Li, Ji;  Ma, Lu;  Liu, Yan;  Lei, Yang;  Xu, Wei;  Wu, Ling-Qing;  Liu, Fan;  Ma, Qian;  Yu, Xin-Ran;  Jiang, Zhi;  Zhang, Guo-Qiang;  Li, Shao-Hua;  Li, Rui-Qiang;  Zhang, Shou-Zhou;  Wang, Qing-Feng;  Van de Peer, Yves;  Zhang, Jin-Bo;  Wang, Xiao-Ming
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