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Evolutionary strategies drive a balance of the interacting gene products for the CBL and CIPK gene families 期刊论文
NEW PHYTOLOGIST, 2020, 卷号: 226, 期号: 5, 页码: 1506-1516
Authors:  Zhang, Xiaoxia;  Li, Xiaoxia;  Zhao, Ran;  Zhou, Yun;  Jiao, Yuannian
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calcineurin B-like (CBL)  CBL-interacting protein kinase (CIPK)  gene balance hypothesis (GBH)  gene retention  whole-genome duplication (WGD)  
Gene body demethylation increases expression and is associated with self-pruning during grape genome duplication 期刊论文
HORTICULTURE RESEARCH, 2020, 卷号: 7, 期号: 1
Authors:  Zou, Luming;  Liu, Wenwen;  Zhang, Zhan;  Edwards, Everard J.;  Gathunga, Elias Kirabi;  Fan, Peige;  Duan, Wei;  Li, Shaohua;  Liang, Zhenchang
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Deciphering the high-quality genome sequence of coriander that causes controversial feelings 期刊论文
PLANT BIOTECHNOLOGY JOURNAL, 2020, 卷号: 18, 期号: 6, 页码: 1444-1456
Authors:  Song, Xiaoming;  Wang, Jinpeng;  Li, Nan;  Yu, Jigao;  Meng, Fanbo;  Wei, Chendan;  Liu, Chao;  Chen, Wei;  Nie, Fulei;  Zhang, Zhikang;  Gong, Ke;  Li, Xinyu;  Hu, Jingjing;  Yang, Qihang;  Li, Yuxian;  Li, Chunjin;  Feng, Shuyan;  Guo, He;  Yuan, Jiaqing;  Pei, Qiaoying;  Yu, Tong;  Kang, Xi;  Zhao, Wei;  Lei, Tianyu;  Sun, Pengchuan;  Wang, Li;  Ge, Weina;  Guo, Di;  Duan, Xueqian;  Shen, Shaoqi;  Cui, Chunlin;  Yu, Ying;  Xie, Yangqin;  Zhang, Jin;  Hou, Yue;  Wang, Jianyu;  Wang, Jinyu;  Li, Xiu-Qing;  Paterson, Andrew H.;  Wang, Xiyin
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De novo coriander genome  tetraploid  genome evolution  terpenoid biosynthesis pathway  RNA-Seq  metabolomics  
Chromosome-level genome assembly of a parent species of widely cultivated azaleas 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1
Authors:  Yang, Fu-Sheng;  Nie, Shuai;  Liu, Hui;  Shi, Tian-Le;  Tian, Xue-Chan;  Zhou, Shan-Shan;  Bao, Yu-Tao;  Jia, Kai-Hua;  Guo, Jing-Fang;  Zhao, Wei;  An, Na;  Zhang, Ren-Gang;  Yun, Quan-Zheng;  Wang, Xin-Zhu;  Mannapperuma, Chanaka;  Porth, Ilga;  El-Kassaby, Yousry Aly;  Street, Nathaniel Robert;  Wang, Xiao-Ru;  Van de Peer, Yves;  Mao, Jian-Feng
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The ancient wave of polyploidization events in flowering plants and their facilitated adaptation to environmental stress 期刊论文
PLANT CELL AND ENVIRONMENT, 2020, 卷号: 43, 期号: 12, 页码: 2847-2856
Authors:  Zhang, Liangsheng;  Wu, Shengdan;  Chang, Xiaojun;  Wang, Xiuyun;  Zhao, Yunpeng;  Xia, Yiping;  Trigiano, Robert N.;  Jiao, Yuannian;  Chen, Fei
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angiosperms  gene duplication  polyploidy  Nymphaeales  
Genetic Contribution of Paleopolyploidy to Adaptive Evolution in Angiosperms 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 1, 页码: 59-71
Authors:  Wu, Shengdan;  Han, Baocai;  Jiao, Yuannian
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whole-genome duplication  paleopolyploidy  adaptive evolution  phylogenomic  Cretaceous-Paleocene boundary  gene regulatory network  
The water lily genome and the early evolution of flowering plants 期刊论文
NATURE, 2020, 卷号: 577, 页码: 79-84
Authors:  Zhang, Liangsheng;  Chen, Fei;  Zhang, Xingtan;  Li, Zhen;  Zhao, Yiyong;  Lohaus, Rolf;  Chang, Xiaojun;  Dong, Wei;  Ho, Simon Y. W.;  Liu, Xing;  Song, Aixia;  Chen, Junhao;  Guo, Wenlei;  Wang, Zhengjia;  Zhuang, Yingyu;  Wang, Haifeng;  Chen, Xuequn;  Hu, Juan;  Liu, Yanhui;  Qin, Yuan;  Wang, Kai;  Dong, Shanshan;  Liu, Yang;  Zhang, Shouzhou;  Yu, Xianxian;  Wu, Qian;  Wang, Liangsheng;  Yan, Xueqing;  Jiao, Yuannian;  Kong, Hongzhi;  Zhou, Xiaofan;  Yu, Cuiwei;  Chen, Yuchu;  Li, Fan;  Wang, Jihua;  Chen, Wei;  Chen, Xinlu;  Jia, Qidong;  Zhang, Chi;  Jiang, Yifan;  Zhang, Wanbo;  Liu, Guanhua;  Fu, Jianyu;  Chen, Feng;  Ma, Hong;  Van de Peer, Yves;  Tang, Haibao
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The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 2, 页码: 336-350
Authors:  Liu, Jin;  Shi, Cong;  Shi, Cheng-Cheng;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Li, Kui;  Lu, Hui-Fang;  Shi, Chao;  Zhu, Si-Tao;  Xiao, Zai-Yun;  Nan, Hong;  Yue, Yao;  Zhu, Xun-Ge;  Wu, Yu;  Hong, Xiao-Ning;  Fan, Guang-Yi;  Tong, Yan;  Zhang, Dan;  Mao, Chang-Li;  Liu, Yun-Long;  Hao, Shi-Jie;  Liu, Wei-Qing;  Lv, Mei-Qi;  Zhang, Hai-Bin;  Liu, Yuan;  Hu-tang, Ge-Ran;  Wang, Jin-Peng;  Wang, Jia-Hao;  Sun, Ying-Huai;  Ni, Shu-Bang;  Chen, Wen-Bin;  Zhang, Xing-Cai;  Jiao, Yuan-Nian;  Eichler, Evan E.;  Li, Guo-Hua;  Liu, Xin;  Gao, Li-Zhi
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rubber tree  rubber biosynthesis  chromosome evolution  whole-genome duplication  domestication  
The Tetracentron genome provides insight into the early evolution of eudicots and the formation of vessel elements 期刊论文
GENOME BIOLOGY, 2020, 卷号: 21, 期号: 1
Authors:  Liu, Ping-Li;  Zhang, Xi;  Mao, Jian-Feng;  Hong, Yan-Ming;  Zhang, Ren-Gang;  Yilan, E.;  Nie, Shuai;  Jia, Kaihua;  Jiang, Chen-Kun;  He, Jian;  Shen, Weiwei;  He, Qizouhong;  Zheng, Wenqing;  Abbas, Samar;  Jewaria, Pawan Kumar;  Tian, Xuechan;  Liu, Chang-jun;  Jiang, Xiaomei;  Yin, Yafang;  Liu, Bo;  Wang, Li;  Jin, Biao;  Ma, Yongpeng;  Qiu, Zongbo;  Baluska, Frantisek;  Samaj, Jozef;  He, Xinqiang;  Niu, Shihui;  Xie, Jianbo;  Xie, Lei;  Xu, Huimin;  Kong, Hongzhi;  Ge, Song;  Dixon, Richard A.;  Jiao, Yuannian;  Lin, Jinxing
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Tetracentron sinense  Vessel  Phylogenomic  Whole genome duplication  VND7  Resequencing  Genetic diversity  
Gene duplication and genetic innovation in cereal genomes 期刊论文
GENOME RESEARCH, 2019, 卷号: 29, 期号: 2, 页码: 261-269
Authors:  Guo, Hui;  Jiao, Yuannian;  Tan, Xu;  Wang, Xiyin;  Huang, Xianzhong;  Jin, Huizhe;  Paterson, Andrew H.
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