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Recent advances on phylogenomics of gymnosperms and a new classification 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 4, 页码: 340-350
作者:  Yang, Yong;  Ferguson, David Kay;  Liu, Bing;  Mao, Kang-Shan;  Gao, Lian-Ming;  Zhang, Shou-Zhou;  Wan, Tao;  Rushforth, Keith;  Zhang, Zhi-Xiang
Adobe PDF(2502Kb)  |  收藏  |  浏览/下载：18/0  |  提交时间：2024/03/07
Classi fication  Gymnosperms  Morphology  New tribe  Phylogenomics  Taxonomy  
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：18/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Organization, Phylogenetic Marker Exploitation, and Gene Evolution in the Plastome of Thalictrum (Ranunculaceae) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13
作者:  Xiang, Kun-Li;  Mao, Wei;  Peng, Huan-Wen;  Erst, Andrey S.;  Yang, Ying-Xue;  He, Wen-Chuang;  Wu, Zhi-Qiang
Adobe PDF(3174Kb)  |  收藏  |  浏览/下载：16/0  |  提交时间：2024/03/07
Thalictrum  plastid genome  genome structure  molecular markers  phylogeny  
Phylogenomics and biogeography of Catalpa (Bignoniaceae) reveal incomplete lineage sorting and three dispersal events 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 166
作者:  Dong, Wenpan;  Liu, Yanlei;  Li, Enze;  Xu, Chao;  Sun, Jiahui;  Li, Wenying;  Zhou, Shiliang;  Zhang, Zhixiang;  Suo, Zhili
Adobe PDF(2844Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Biogeography  Catalpa  Dispersal  Incomplete lineage sorting  Interspecific gene flow  Phylogenomics  
Out of the Pan-Himalaya: Evolutionary history of the Paeoniaceae revealed by phylogenomics 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1170-1182
作者:  Zhou, Shi-Liang;  Xu, Chao;  Liu, Jing;  Yu, Yan;  Wu, Ping;  Cheng, Tao;  Hong, De-Yuan
Adobe PDF(1288Kb)  |  收藏  |  浏览/下载：73/0  |  提交时间：2023/02/24
biogeography  molecular dating  Paeonia  phylogeny  reticulate evolution  
On the Species Delimitation of the Maddenia Group of Prunus (Rosaceae): Evidence From Plastome and Nuclear Sequences and Morphology 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12
作者:  Su, Na;  Liu, Bin-bin;  Wang, Jun-ru;  Tong, Ru-chang;  Ren, Chen;  Chang, Zhao-yang;  Zhao, Liang;  Potter, Daniel;  Wen, Jun
Adobe PDF(6786Kb)  |  收藏  |  浏览/下载：83/0  |  提交时间：2023/02/24
Maddenia  Prunus  Rosaceae  barcoding  chloroplast genome  single-copy nuclear genes  species delimitation  
Capturing single-copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in Vitaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 5, 页码: 1124-1138
作者:  Liu, Bin-Bin;  Ma, Zhi-Yao;  Ren, Chen;  Hodel, Richard G. J.;  Sun, Miao;  Liu, Xiu-Qun;  Liu, Guang-Ning;  Hong, De-Yuan;  Zimmer, Elizabeth A.;  Wen, Jun
Adobe PDF(2650Kb)  |  收藏  |  浏览/下载：70/0  |  提交时间：2023/02/24
deep genome skimming  Hyb-Seq  mitochondrial genes  nuclear ribosomal DNA  single-copy nuclear genes  Vitaceae  
The origin of allotetraploid Lepisorus inaequibasis (Polypodiaceae) and paternal bias in its morphology and abiotic niche 期刊论文
TAXON, 2020, 卷号: 69, 期号: 1, 页码: 43-55
作者:  Zhao, Cun-Feng;  Wei, Ran;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(7102Kb)  |  收藏  |  浏览/下载：112/0  |  提交时间：2022/03/01
hybrid origin  paternal preference  polyploid  reticulate evolution  
Resolving interspecific relationships within evolutionarily young lineages using RNA-seq data: An example from Pedicularis section Cyathophora (Orobanchaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2017, 卷号: 107, 页码: 345-355
作者:  Wang, Hong-Juan;  Li, Wei-Tao;  Liu, Ya-Nan;  Yang, Fu-Sheng;  Wang, Xiao-Quan
Adobe PDF(1607Kb)  |  收藏  |  浏览/下载：112/0  |  提交时间：2022/03/28
Non-neutral gene  Phylogenomics  Phylogeny  Recent radiation  Selective pressure  Transcriptome  
Phylogenetic Resolution in Juglans Based on Complete Chloroplast Genomes and Nuclear DNA Sequences 期刊论文
FRONTIERS IN PLANT SCIENCE, 2017, 卷号: 8
作者:  Dong, Wenpan;  Xu, Chao;  Li, Wenqing;  Xie, Xiaoman;  Lu, Yizeng;  Liu, Yanlei;  Jin, Xiaobai;  Suo, Zhili
Adobe PDF(1621Kb)  |  收藏  |  浏览/下载：78/0  |  提交时间：2022/03/28
Juglans  complete chloroplast genome  small inversion  internal transcribed spacer  ubiquitin ligase gene  phylogeny