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Early Domestication History of Asian Rice Revealed by Mutations and Genome-Wide Analysis of Gene Genealogies 期刊论文
RICE, 2022, 卷号: 15, 期号: 1
作者:  Lu, Yingqing;  Xu, Yunzhang;  Li, Nan
Adobe PDF(1603Kb)  |  收藏  |  浏览/下载：9/0  |  提交时间：2024/03/07
5 ' Genealogy  Coding genealogy  Early mutations  Positive selection  New alleles  Domestication genes  Domesticated traits  Gene type  Hybrid origin  Asian rice  
Stepwise selection of natural variations at CTB2 and CTB4a improves cold adaptation during domestication of japonica rice 期刊论文
NEW PHYTOLOGIST, 2021, 卷号: 231, 期号: 3, 页码: 1056-1072
作者:  Li, Jilong;  Zeng, Yawen;  Pan, Yinghua;  Zhou, Lei;  Zhang, Zhanying;  Guo, Haifeng;  Lou, Qijin;  Shui, Guanghou;  Huang, Hanguang;  Tian, He;  Guo, Yongmei;  Yuan, Pingrong;  Yang, Hong;  Pan, Guojun;  Wang, Ruiying;  Zhang, Hongliang;  Yang, Shuhua;  Guo, Yan;  Ge, Song;  Li, Jinjie;  Li, Zichao
Adobe PDF(2933Kb)  |  收藏  |  浏览/下载：76/0  |  提交时间：2023/02/24
cold adaptation  de novo mutation  rice  standing variation  stepwise selection  
Identification of long noncoding natural antisense transcripts (lncNATs) correlated with drought stress response in wild rice (Oryza nivara) 期刊论文
BMC GENOMICS, 2021, 卷号: 22, 期号: 1
作者:  Xu, Yong-Chao;  Zhang, Jie;  Zhang, Dong-Yan;  Nan, Ying-Hui;  Ge, Song;  Guo, Ya-Long
Adobe PDF(3950Kb)  |  收藏  |  浏览/下载：72/0  |  提交时间：2023/02/24
Drought stress  Long noncoding RNA  O  nivara  Strand-specific RNA-seq  Wild rice  
Transcriptomic and proteomic responses to brown plant hopper (Nilaparvata lugens) in cultivated and Bt-transgenic rice (Oryza sativa) and wild rice (O. rufipogon) 期刊论文
JOURNAL OF PROTEOMICS, 2021, 卷号: 232
作者:  Liu, Yongbo;  Wang, Weiqing;  Li, Yonghua;  Liu, Fang;  Han, Weijuan;  Li, Junsheng
Adobe PDF(3713Kb)  |  收藏  |  浏览/下载：91/0  |  提交时间：2023/02/24
Crop domestication  Crop wild species  Herbivory  Transgenic rice  Transcriptomic  Proteomic analysis  
Genetic and Geographic Patterns of Duplicate DPL Genes Causing Genetic Incompatibility Within Rice: Implications for Multiple Domestication Events in Rice 期刊论文
RICE SCIENCE, 2021, 卷号: 28, 期号: 1, 页码: 58-68
作者:  Xu Xun;  Ge Song;  Zhang Fumin
Adobe PDF(300Kb)  |  收藏  |  浏览/下载：71/0  |  提交时间：2023/02/24
rice  DPL gene  domestication  genetic incompatibility  phylogeography  
Divergence in flowering time is a major component contributing to reproductive isolation between two wild rice species (Oryza rufipogon and O. nivara) 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 卷号: 63, 期号: 11, 页码: 1714-1724
作者:  Xu, Xun;  Meng, Qing-Lin;  Geng, Mu-Fan;  Ren, Ning-Ning;  Zhou, Lian;  Du, Yu-Su;  Cai, Zhe;  Wang, Mei-Xia;  Wang, Xin;  Wang, Xiu-Hua;  Han, Jing-Dan;  Jiang, Shuai;  Jing, Chun-Yan;  Liu, Rong;  Zheng, Xiao-Ming;  Yang, Qing-Wen;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(899Kb)  |  收藏  |  浏览/下载：120/0  |  提交时间：2022/03/01
reproductive isolation  flowering time  speciation  adaptation  Oryza species  
Parallel Speciation of Wild Rice Associated with Habitat Shifts 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 5, 页码: 875-889
作者:  Cai, Zhe;  Zhou, Lian;  Ren, Ning-Ning;  Xu, Xun;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Meng, Qing-Lin;  Du, Yu-Su;  Wang, Mei-Xia;  Geng, Mu-Fan;  Chen, Wen-Li;  Jing, Chun-Yan;  Zou, Xin-Hui;  Guo, Jie;  Chen, Cheng-Bin;  Zeng, Hua-Zhong;  Liang, Yun-Tao;  Wei, Xing-Hua;  Guo, Ya-Long;  Zhou, Hai-Fei;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(887Kb)  |  收藏  |  浏览/下载：2618/0  |  提交时间：2022/01/06
parallel speciation  reproductive isolation  adaptation  divergent selection  wild rice  
Population genetics and evolutionary history of the wild rice species Oryza rufipogon and O-nivara in Sri Lanka 期刊论文
ECOLOGY AND EVOLUTION, 2018, 卷号: 8, 期号: 23, 页码: 12056-12065
作者:  Sandamal, Salinda;  Tennakoon, Asanka;  Meng, Qing-Lin;  Marambe, Buddhi;  Ratnasekera, Disna;  Melo, Arthur;  Ge, Song
Adobe PDF(1252Kb)  |  收藏  |  浏览/下载：81/0  |  提交时间：2022/02/25
evolutionary history  O. nivara  O. rufipogon  population genetics  Sri Lanka  
China's crop wild relatives: Diversity for agriculture and food security 期刊论文
AGRICULTURE ECOSYSTEMS & ENVIRONMENT, 2015, 卷号: 209, 页码: 138-154
作者:  Kell, Shelagh;  Qin, Haining;  Chen, Bin;  Ford-Lloyd, Brian;  Wei, Wei;  Kang, Dingming;  Maxted, Nigel
Adobe PDF(2283Kb)  |  收藏  |  浏览/下载：61/0  |  提交时间：2022/09/13
Crop wild relative  Plant genetic resources  Gene donor  Crop improvement  Climate change  Food security  Prioritization  Red List status  Conservation strategy  
An-2 Encodes a Cytokinin Synthesis Enzyme that Regulates Awn Length and Grain Production in Rice 期刊论文
MOLECULAR PLANT, 2015, 卷号: 8, 期号: 11, 页码: 1635-1650
作者:  Gu, Benguo;  Zhou, Taoying;  Luo, Jianghong;  Liu, Hui;  Wang, Yongchun;  Shangguan, Yingying;  Zhu, Jingjie;  Li, Yan;  Sang, Tao;  Wang, Zixuan;  Han, Bin
Adobe PDF(3841Kb)  |  收藏  |  浏览/下载：59/0  |  提交时间：2022/09/13
Oryza sativa  awn  domestication  cytokinin synthesis enzyme  grain yield