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Genome-wide investigation on transcriptional responses to drought stress in wild and cultivated rice 期刊论文
ENVIRONMENTAL AND EXPERIMENTAL BOTANY, 2021, 卷号: 189
作者:  Geng, Mu-Fan;  Wang, Xiu-Hua;  Wang, Mei-Xia;  Cai, Zhe;  Meng, Qing-Lin;  Wang, Xin;  Zhou, Lian;  Han, Jing-Dan;  Li, Ji-Long;  Zhang, Fu-Min;  Guo, Ya-Long;  Ge, Song
Adobe PDF(3006Kb)  |  收藏  |  浏览/下载：80/0  |  提交时间：2023/02/24
Drought stress  RNA-seq  WGCNA  Genomic hotspot  Cultivated and wild rice  
Divergence in flowering time is a major component contributing to reproductive isolation between two wild rice species (Oryza rufipogon and O. nivara) 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 卷号: 63, 期号: 11, 页码: 1714-1724
作者:  Xu, Xun;  Meng, Qing-Lin;  Geng, Mu-Fan;  Ren, Ning-Ning;  Zhou, Lian;  Du, Yu-Su;  Cai, Zhe;  Wang, Mei-Xia;  Wang, Xin;  Wang, Xiu-Hua;  Han, Jing-Dan;  Jiang, Shuai;  Jing, Chun-Yan;  Liu, Rong;  Zheng, Xiao-Ming;  Yang, Qing-Wen;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(899Kb)  |  收藏  |  浏览/下载：120/0  |  提交时间：2022/03/01
reproductive isolation  flowering time  speciation  adaptation  Oryza species  
Large-scale Identification and Time-course Quantification of Ubiquitylation Events During Maize Seedling De-etiolation (vol 17, pg 603, 2019) 期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 卷号: 18, 期号: 4, 页码: 488-488
作者:  Wang, Yue-Feng;  Chao, Qing;  Li, Zhe;  Lu, Tian-Cong;  Zheng, Hai-Yan;  Zhao, Cai-Feng;  Shen, Zhuo;  Li, Xiao-Hui;  Wang, Bai-Chen
Adobe PDF(6872Kb)  |  收藏  |  浏览/下载：108/0  |  提交时间：2022/03/01
Genome-wide transcriptome and proteome profiles indicate an active role of alternative splicing during de-etiolation of maize seedlings 期刊论文
PLANTA, 2020, 卷号: 252, 期号: 4
作者:  Yan, Zhen;  Shen, Zhuo;  Li, Zhe;  Chao, Qing;  Kong, Lei;  Gao, Zhi-Fang;  Li, Qing-Wei;  Zheng, Hai-Yan;  Zhao, Cai-Feng;  Lu, Cong-Ming;  Wang, Ying-Wei;  Wang, Bai-Chen
Adobe PDF(6589Kb)  |  收藏  |  浏览/下载：102/0  |  提交时间：2022/03/01
Alternative splicing  De-etiolation  Maize seedlings  Proteome  Transcriptome  
Large-scale Identification and Time -course Quantification of Ubiquitylation Events During Maize Seedling De -etiolation 期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2019, 卷号: 17, 期号: 6, 页码: 603-622
作者:  Wang, Yue-Feng;  Chao, Qing;  Li, Zhe;  Lu, Tian-Cong;  Zheng, Hai-Yan;  Zhao, Cai-Feng;  Shen, Zhuo;  Li, Xiao-Hui;  Wang, Bai-Chen
Adobe PDF(3900Kb)  |  收藏  |  浏览/下载：97/0  |  提交时间：2022/01/06
Maize seedling leaf  De-etiolation  Ubiquitylation  C4 photosynthetic enzymes  Ribosome  
Parallel Speciation of Wild Rice Associated with Habitat Shifts 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 5, 页码: 875-889
作者:  Cai, Zhe;  Zhou, Lian;  Ren, Ning-Ning;  Xu, Xun;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Meng, Qing-Lin;  Du, Yu-Su;  Wang, Mei-Xia;  Geng, Mu-Fan;  Chen, Wen-Li;  Jing, Chun-Yan;  Zou, Xin-Hui;  Guo, Jie;  Chen, Cheng-Bin;  Zeng, Hua-Zhong;  Liang, Yun-Tao;  Wei, Xing-Hua;  Guo, Ya-Long;  Zhou, Hai-Fei;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(887Kb)  |  收藏  |  浏览/下载：2609/0  |  提交时间：2022/01/06
parallel speciation  reproductive isolation  adaptation  divergent selection  wild rice  
Population genetics and evolutionary history of Miscanthus species in China 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 卷号: 57, 期号: 5, 页码: 530-542
作者:  Li, Shan-Shan;  Zhou, Hai-Fei;  Chen, Wen-Li;  Yan, Juan;  Cai, Zhe;  Wei, Ruo-Xun;  Chen, Chih-Hui;  Han, Bin;  Li, Jian-Qiang;  Sang, Tao;  Ge, Song
Adobe PDF(1772Kb)  |  收藏  |  浏览/下载：140/0  |  提交时间：2022/01/06
energy crop  genetic structure  Miscanthus  population dynamics  speciation  
Machine learning algorithms improve the power of phytolith analysis: A case study of the tribe Oryzeae (Poaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2017, 卷号: 55, 期号: 4, 页码: 377-384
作者:  Cai, Zhe;  Ge, Song
Adobe PDF(3525Kb)  |  收藏  |  浏览/下载：75/0  |  提交时间：2022/03/28
machine learning  morphological character  phytolith  Poaceae  taxon discrimination  
Phenological evidence from China to address rapid shifts in global flowering times with recent climate change 期刊论文
AGRICULTURAL AND FOREST METEOROLOGY, 2017, 卷号: 246, 页码: 22-30
作者:  Mo, Fei;  Zhang, Jian;  Wang, Jing;  Cheng, Zheng-Guo;  Sun, Guo-Jun;  Ren, Hong-Xu;  Zhao, Xu-Zhe;  Cheruiyot, Wesly K.;  Kavagi, Levis;  Wang, Jian-Yong;  Xiong, You-Cai
Adobe PDF(2595Kb)  |  收藏  |  浏览/下载：89/0  |  提交时间：2022/03/28
Flowering time  Phenological shift  Climate change  Meta-analysis  China  
Widespread and Adaptive Alterations in Genome-Wide Gene Expression Associated with Ecological Divergence of Two Oryza Species 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2016, 卷号: 33, 期号: 1, 页码: 62-78
作者:  Guo, Jie;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Liu, Ping-Li;  Du, Yu-Su;  Cai, Zhe;  Zhou, Lian;  Wei, Xing-Hua;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(782Kb)  |  收藏  |  浏览/下载：82/0  |  提交时间：2022/07/08
ecological speciation  expression evolution  adaptation  wild rice