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Genome-wide transcriptome and proteome profiles indicate an active role of alternative splicing during de-etiolation of maize seedlings 期刊论文
PLANTA, 2020, 卷号: 252, 期号: 4
Authors:  Yan, Zhen;  Shen, Zhuo;  Li, Zhe;  Chao, Qing;  Kong, Lei;  Gao, Zhi-Fang;  Li, Qing-Wei;  Zheng, Hai-Yan;  Zhao, Cai-Feng;  Lu, Cong-Ming;  Wang, Ying-Wei;  Wang, Bai-Chen
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Alternative splicing  De-etiolation  Maize seedlings  Proteome  Transcriptome  
Divergence in flowering time is a major component contributing to reproductive isolation between two wild rice species (Oryza rufipogon and O. nivara) 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 卷号: 63, 期号: 11, 页码: 1714-1724
Authors:  Xu, Xun;  Meng, Qing-Lin;  Geng, Mu-Fan;  Ren, Ning-Ning;  Zhou, Lian;  Du, Yu-Su;  Cai, Zhe;  Wang, Mei-Xia;  Wang, Xin;  Wang, Xiu-Hua;  Han, Jing-Dan;  Jiang, Shuai;  Jing, Chun-Yan;  Liu, Rong;  Zheng, Xiao-Ming;  Yang, Qing-Wen;  Zhang, Fu-Min;  Ge, Song
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reproductive isolation  flowering time  speciation  adaptation  Oryza species  
Large-scale Identification and Time-course Quantification of Ubiquitylation Events During Maize Seedling De-etiolation (vol 17, pg 603, 2019) 期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 卷号: 18, 期号: 4, 页码: 488-488
Authors:  Wang, Yue-Feng;  Chao, Qing;  Li, Zhe;  Lu, Tian-Cong;  Zheng, Hai-Yan;  Zhao, Cai-Feng;  Shen, Zhuo;  Li, Xiao-Hui;  Wang, Bai-Chen
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Population genetics and evolutionary history of Miscanthus species in China 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 卷号: 57, 期号: 5, 页码: 530-542
Authors:  Li, Shan-Shan;  Zhou, Hai-Fei;  Chen, Wen-Li;  Yan, Juan;  Cai, Zhe;  Wei, Ruo-Xun;  Chen, Chih-Hui;  Han, Bin;  Li, Jian-Qiang;  Sang, Tao;  Ge, Song
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energy crop  genetic structure  Miscanthus  population dynamics  speciation  
Large-scale Identification and Time -course Quantification of Ubiquitylation Events During Maize Seedling De -etiolation 期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2019, 卷号: 17, 期号: 6, 页码: 603-622
Authors:  Wang, Yue-Feng;  Chao, Qing;  Li, Zhe;  Lu, Tian-Cong;  Zheng, Hai-Yan;  Zhao, Cai-Feng;  Shen, Zhuo;  Li, Xiao-Hui;  Wang, Bai-Chen
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Maize seedling leaf  De-etiolation  Ubiquitylation  C4 photosynthetic enzymes  Ribosome  
Parallel Speciation of Wild Rice Associated with Habitat Shifts 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 5, 页码: 875-889
Authors:  Cai, Zhe;  Zhou, Lian;  Ren, Ning-Ning;  Xu, Xun;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Meng, Qing-Lin;  Du, Yu-Su;  Wang, Mei-Xia;  Geng, Mu-Fan;  Chen, Wen-Li;  Jing, Chun-Yan;  Zou, Xin-Hui;  Guo, Jie;  Chen, Cheng-Bin;  Zeng, Hua-Zhong;  Liang, Yun-Tao;  Wei, Xing-Hua;  Guo, Ya-Long;  Zhou, Hai-Fei;  Zhang, Fu-Min;  Ge, Song
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parallel speciation  reproductive isolation  adaptation  divergent selection  wild rice  
Machine learning algorithms improve the power of phytolith analysis: A case study of the tribe Oryzeae (Poaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2017, 卷号: 55, 期号: 4, 页码: 377-384
Authors:  Cai, Zhe;  Ge, Song
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machine learning  morphological character  phytolith  Poaceae  taxon discrimination  
Phenological evidence from China to address rapid shifts in global flowering times with recent climate change 期刊论文
AGRICULTURAL AND FOREST METEOROLOGY, 2017, 卷号: 246, 页码: 22-30
Authors:  Mo, Fei;  Zhang, Jian;  Wang, Jing;  Cheng, Zheng-Guo;  Sun, Guo-Jun;  Ren, Hong-Xu;  Zhao, Xu-Zhe;  Cheruiyot, Wesly K.;  Kavagi, Levis;  Wang, Jian-Yong;  Xiong, You-Cai
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Flowering time  Phenological shift  Climate change  Meta-analysis  China  
Widespread and Adaptive Alterations in Genome-Wide Gene Expression Associated with Ecological Divergence of Two Oryza Species 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2016, 卷号: 33, 期号: 1, 页码: 62-78
Authors:  Guo, Jie;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Liu, Ping-Li;  Du, Yu-Su;  Cai, Zhe;  Zhou, Lian;  Wei, Xing-Hua;  Zhang, Fu-Min;  Ge, Song
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ecological speciation  expression evolution  adaptation  wild rice  
Utility of surface pollen assemblages to delimit eastern Eurasian steppe tyes 期刊论文
PLoS One, 2015, 卷号: 10, 期号: 3, 页码: e0119412
Authors:  Feng Qin;  Yu-Fei Wang;  David K. Ferguson;  Wen-Li Chen;  Ya-Meng Li;  Zhe Cai;  Qing Wang;  Hong-Zhen Ma;  Cheng-Sen Li
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