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Phylogeography of the widespread fern Lemmaphyllum in East Asia: species differentiation and population dynamics in response to change in climate and geography 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 2, 页码: 411-432
作者:  Wei, Xue-Ping;  Zhang, Xian-Chun
Adobe PDF(2355Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
genetic structure  glacial refuge  phylogeny  Polypodiaceae  Quaternary climatic oscillations  speciation  
The associated evolution among the extensive RNA editing, GC-biased mutation, and PPR family expansion in the organelle genomes of Selaginellaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022
作者:  Kang, Jong-Soo;  Yu, Jigao;  Zhang, Xian-Chun;  Xiang, Qiao-Ping
Adobe PDF(1627Kb)  |  收藏  |  浏览/下载：10/0  |  提交时间：2024/03/07
GC-biased mutation  mitochondrial genome (mitogenome)  pentatricopeptide repeat (PPR) protein  plastid genome (plastome)  RNA editing  Selaginellaceae  
Genome size evolution of the extant lycophytes and ferns 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 2, 页码: 141-152
作者:  Wang, Fa-Guo;  Wang, Ai-Hua;  Bai, Cheng-Ke;  Jin, Dong-Mei;  Nie, Li-Yun;  Harris, A. J.;  Che, Le;  Wang, Juan-Juan;  Li, Shi-Yu;  Xu, Lei;  Shen, Hui;  Gu, Yu-Feng;  Shang, Hui;  Duan, Lei;  Zhang, Xian-Chun;  Chen, Hong-Feng;  Yan, Yue-Hong
Adobe PDF(2515Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
Genome size  Ferns  Chromosome numbers  Habitat type  Whole-genome duplications  Evolution  
Ecological adaptation shaped the genetic structure of homoploid ferns against strong dispersal capacity 期刊论文
MOLECULAR ECOLOGY, 2022, 卷号: 31, 期号: 9, 页码: 2679-2697
作者:  Liang, Si-Qi;  Zhang, Xian-Chun;  Wei, Ran
Adobe PDF(1701Kb)  |  收藏  |  浏览/下载：16/0  |  提交时间：2024/03/07
dispersal  gene flow  homoploid  homosporous ferns  local adaptation  RAD-seq  
The evolution of extremely diverged plastomes in Selaginellaceae (lycophyte) is driven by repeat patterns and the underlying DNA maintenance machinery 期刊论文
PLANT JOURNAL, 2022, 卷号: 111, 期号: 3, 页码: 768-784
作者:  Xiang, Qiao-Ping;  Tang, Jun-Yong;  Yu, Ji-Gao;  Smith, David Roy;  Zhu, Yan-Mei;  Wang, Ya-Rong;  Kang, Jong-Soo;  Yang, Jie;  Zhang, Xian-Chun
Adobe PDF(1628Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
Selaginella sinensis  network plastome  perfect repeats  dynamic mitogenome  GC content  RNA editing  
Plastid phylogenomic analyses of the Selaginella sanguinolenta group (Selaginellaceae) reveal conflict signatures resulting from sequence types, outlier genes, and pervasive RNA editing 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 173
作者:  Zhang, Meng-Hua;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(5084Kb)  |  收藏  |  浏览/下载：12/0  |  提交时间：2024/03/07
Alternative topologies  Gene-tree conflict  Plastome  Phylogenetic signal  Selaginella sanguinolenta group  Species trees  
Plastid phylogenomics provides novel insights into the infrafamilial relationship of Polypodiaceae 期刊论文
CLADISTICS, 2021, 卷号: 37, 期号: 6, 页码: 717-727
作者:  Wei, Ran;  Yang, Jie;  He, Li-Juan;  Liu, Hong-Mei;  Hu, Jia-Yu;  Liang, Si-Qi;  Wei, Xue-Ping;  Zhao, Cun-Feng;  Zhang, Xian-Chun
Adobe PDF(476Kb)  |  收藏  |  浏览/下载：77/0  |  提交时间：2023/02/24
The origin of allotetraploid Lepisorus inaequibasis (Polypodiaceae) and paternal bias in its morphology and abiotic niche 期刊论文
TAXON, 2020, 卷号: 69, 期号: 1, 页码: 43-55
作者:  Zhao, Cun-Feng;  Wei, Ran;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(7102Kb)  |  收藏  |  浏览/下载：103/0  |  提交时间：2022/03/01
hybrid origin  paternal preference  polyploid  reticulate evolution  
Phylogeny of Diplazium (Athyriaceae) revisited: Resolving the backbone relationships based on plastid genomes and phylogenetic tree space analysis 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2020, 卷号: 143
作者:  Wei, Ran;  Zhang, Xian-Chun
Adobe PDF(367Kb)  |  收藏  |  浏览/下载：102/0  |  提交时间：2022/03/01
Backbone  Diplazium  Evolutionary radiation  Plastome  Phylogenetic clustering  
Plastome-based phylogenomics resolves the placement of the sanguinolenta group in the spikemoss of lycophyte (Selaginellaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2020, 卷号: 147
作者:  Zhang, Hong-Rui;  Wei, Ran;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(1456Kb)  |  收藏  |  浏览/下载：94/0  |  提交时间：2022/03/01
GC content  Nucleotide substitution rate  Phylogeny  Plastome  Sanguinolenta group