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Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
A genome for Cissus illustrates features underlying its evolutionary success in dry savannas 期刊论文
HORTICULTURE RESEARCH, 2022, 卷号: 9
作者:  Xin, Haiping;  Wang, Yi;  Li, Qingyun;  Wan, Tao;  Hou, Yujun;  Liu, Yuanshuang;  Gichuki, Duncan Kiragu;  Zhou, Huimin;  Zhu, Zhenfei;  Xu, Chen;  Zhou, Yadong;  Liu, Zhiming;  Li, Rongjun;  Liu, Bing;  Lu, Limin;  Jiang, Hongsheng;  Zhang, Jisen;  Wan, Junnan;  Aryal, Rishi;  Hu, Guangwan;  Chen, Zhiduan;  Gituru, Robert Wahiti;  Liang, Zhenchang;  Wen, Jun;  Wang, Qingfeng
Adobe PDF(2841Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1
作者:  Dong, Wenpan;  Li, Enze;  Liu, Yanlei;  Xu, Chao;  Wang, Yushuang;  Liu, Kangjia;  Cui, Xingyong;  Sun, Jiahui;  Suo, Zhili;  Zhang, Zhixiang;  Wen, Jun;  Zhou, Shiliang
Adobe PDF(4457Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Ancient introgression  Gene tree conflict  Incomplete lineage sorting  Oleaceae  Phylogenomics  Rate heterogeneity  
Synthesis of Nuclear and Chloroplast Data Combined With Network Analyses Supports the Polyploid Origin of the Apple Tribe and the Hybrid Origin of the Maleae-Gillenieae Clade 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12
作者:  Hodel, Richard G. J.;  Zimmer, Elizabeth A.;  Liu, Bin-Bin;  Wen, Jun
Adobe PDF(3910Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
allopolyploidy  ancient hybridization  cytonuclear conflict  genome doubling  phylogenetic networks  phylogenomics  reticulate evolution  
The genome of Dioscorea zingiberensis sheds light on the biosynthesis, origin and evolution of the medicinally important diosgenin saponins 期刊论文
HORTICULTURE RESEARCH, 2022, 卷号: 9
作者:  Li, Yi;  Tan, Chao;  Li, Zihao;  Guo, Jingzhe;  Li, Song;  Chen, Xin;  Wang, Chen;  Dai, Xiaokang;  Yang, Huan;  Song, Wei;  Hou, Lixiu;  Xu, Jiali;  Tong, Ziyu;  Xu, Anran;  Yuan, Xincheng;  Wang, Weipeng;  Yang, Qingyong;  Chen, Lingling;  Sun, Zongyi;  Wang, Kai;  Pan, Bo;  Chen, Jianghua;  Bao, Yinghua;  Liu, Faguang;  Qi, Xiaoquan;  Gang, David R.;  Wen, Jun;  Li, Jiaru
Adobe PDF(3568Kb)  |  收藏  |  浏览/下载：10/0  |  提交时间：2024/03/07
Phylogenomic relationships and species identification of the olive genus Olea (Oleaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 6, 页码: 1263-1280
作者:  Dong, Wen-Pan;  Sun, Jia-Hui;  Liu, Yan-Lei;  Xu, Chao;  Wang, Yi-Heng;  Suo, Zhi-Li;  Zhou, Shi-Liang;  Zhang, Zhi-Xiang;  Wen, Jun
Adobe PDF(2070Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Olea  phylogenomics  specific DNA barcode  species identification  super-barcode