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Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Out of the Pan-Himalaya: Evolutionary history of the Paeoniaceae revealed by phylogenomics 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1170-1182
作者:  Zhou, Shi-Liang;  Xu, Chao;  Liu, Jing;  Yu, Yan;  Wu, Ping;  Cheng, Tao;  Hong, De-Yuan
Adobe PDF(1288Kb)  |  收藏  |  浏览/下载：66/0  |  提交时间：2023/02/24
biogeography  molecular dating  Paeonia  phylogeny  reticulate evolution  
Phylogenomic analyses of the Photinia complex support the recognition of a new genus Phippsiomeles and the resurrection of a redefined Stranvaesia in Maleae (Rosaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 卷号: 57, 期号: 6, 页码: 678-694
作者:  Liu, Bin-Bin;  Hong, De-Yuan;  Zhou, Shi-Liang;  Xu, Chao;  Dong, Wen-Pan;  Johnson, Gabriel;  Wen, Jun
Adobe PDF(1734Kb)  |  收藏  |  浏览/下载：104/0  |  提交时间：2022/01/06
genome skimming  hybridization  Maleae  nrDNA  Phippsiomeles  Rosaceae  Stranvaesia  
Resolving the systematic positions of enigmatic taxa: Manipulating the chloroplast genome data of Saxifragales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2018, 卷号: 126, 页码: 321-330
作者:  Dong, Wenpan;  Xu, Chao;  Wu, Ping;  Cheng, Tao;  Yu, Jing;  Zhou, Shiliang;  Hong, De-Yuan
Adobe PDF(1378Kb)  |  收藏  |  浏览/下载：81/0  |  提交时间：2022/02/25
Analytical methodology  Paeoniaceae  Phylogenomics  Saxifragales  Systematics error  
Which family? - morphological and phylogenetic analyses of the enigmatic genus Numaeacampa (Campanulaceae) 期刊论文
KEW BULLETIN, 2017, 卷号: 72, 期号: 2
作者:  Wang, Qiang;  Xu, Chao;  Pan, Kai-Yu;  Hong, De-Yuan
Adobe PDF(3333Kb)  |  收藏  |  浏览/下载：80/0  |  提交时间：2022/03/28
Laos  Lycianthes  molecular phylogeny  morphology  Solanaceae  taxonomy.  
Multiple species of wild tree peonies gave rise to the 'king of flowers', Paeonia suffruticosa Andrews 期刊论文
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2014, 卷号: 281, 期号: 1797
作者:  Zhou, Shi-Liang;  Zou, Xin-Hui;  Zhou, Zhi-Qin;  Liu, Jing;  Xu, Chao;  Yu, Jing;  Wang, Qiang;  Zhang, Da-Ming;  Wang, Xiao-Quan;  Ge, Song;  Sang, Tao;  Pan, Kai-Yu;  Hong, De-Yuan
Adobe PDF(730Kb)  |  收藏  |  浏览/下载：40/0  |  提交时间：2023/03/30
conservation  hybridization  Paeonia  RNA-seq  species tree