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Paleo-polyploidization in Lycophytes 期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 卷号: 18, 期号: 3, 页码: 333-340
Authors:  Wang, Jinpeng;  Yu, Jigao;  Sun, Pengchuan;  Li, Chao;  Song, Xiaoming;  Lei, Tianyu;  Li, Yuxian;  Yuan, Jiaqing;  Sun, Sangrong;  Ding, Hongling;  Duan, Xueqian;  Shen, Shaoqi;  Shen, Yanshuang;  Li, Jing;  Meng, Fanbo;  Xie, Yangqin;  Wang, Jianyu;  Hou, Yue;  Zhang, Jin;  Zhang, Xianchun;  Li, Xiu-Qing;  Paterson, Andrew H.;  Wang, Xiyin
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Vascular plant  Lycophytes  Genome  Polyploidy  Evolution  
Deciphering the high-quality genome sequence of coriander that causes controversial feelings 期刊论文
PLANT BIOTECHNOLOGY JOURNAL, 2020, 卷号: 18, 期号: 6, 页码: 1444-1456
Authors:  Song, Xiaoming;  Wang, Jinpeng;  Li, Nan;  Yu, Jigao;  Meng, Fanbo;  Wei, Chendan;  Liu, Chao;  Chen, Wei;  Nie, Fulei;  Zhang, Zhikang;  Gong, Ke;  Li, Xinyu;  Hu, Jingjing;  Yang, Qihang;  Li, Yuxian;  Li, Chunjin;  Feng, Shuyan;  Guo, He;  Yuan, Jiaqing;  Pei, Qiaoying;  Yu, Tong;  Kang, Xi;  Zhao, Wei;  Lei, Tianyu;  Sun, Pengchuan;  Wang, Li;  Ge, Weina;  Guo, Di;  Duan, Xueqian;  Shen, Shaoqi;  Cui, Chunlin;  Yu, Ying;  Xie, Yangqin;  Zhang, Jin;  Hou, Yue;  Wang, Jianyu;  Wang, Jinyu;  Li, Xiu-Qing;  Paterson, Andrew H.;  Wang, Xiyin
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De novo coriander genome  tetraploid  genome evolution  terpenoid biosynthesis pathway  RNA-Seq  metabolomics  
A Collinearity-Incorporating Homology Inference Strategy for Connecting Emerging Assemblies in the Triticeae Tribe as a Pilot Practice in the Plant Pangenomic Era 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 12, 页码: 1694-1708
Authors:  Chen, Yongming;  Song, Wanjun;  Xie, Xiaoming;  Wang, Zihao;  Guan, Panfeng;  Peng, Huiru;  Jiao, Yuannian;  Ni, Zhongfu;  Sun, Qixin;  Guo, Weilong
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homology inference  collinearity  database  pangenome  Triticeae tribe  polyploid  
A meta-analysis of 1,119 manipulative experiments on terrestrial carbon-cycling responses to global change 期刊论文
NATURE ECOLOGY & EVOLUTION, 2019, 卷号: 3, 期号: 9, 页码: 1309-1320
Authors:  Song, Jian;  Wan, Shiqiang;  Piao, Shilong;  Knapp, Alan K.;  Classen, Aimee T.;  Vicca, Sara;  Ciais, Philippe;  Hovenden, Mark J.;  Leuzinger, Sebastian;  Beier, Claus;  Kardol, Paul;  Xia, Jianyang;  Liu, Qiang;  Ru, Jingyi;  Zhou, Zhenxing;  Luo, Yiqi;  Guo, Dali;  Langley, J. Adam;  Zscheischler, Jakob;  Dukes, Jeffrey S.;  Tang, Jianwu;  Chen, Jiquan;  Hofmockel, Kirsten S.;  Kueppers, Lara M.;  Rustad, Lindsey;  Liu, Lingli;  Smith, Melinda D.;  Templer, Pamela H.;  Thomas, R. Quinn;  Norby, Richard J.;  Phillips, Richard P.;  Niu, Shuli;  Fatichi, Simone;  Wang, Yingping;  Shao, Pengshuai;  Han, Hongyan;  Wang, Dandan;  Lei, Lingjie;  Wang, Jiali;  Li, Xiaona;  Zhang, Qian;  Li, Xiaoming;  Su, Fanglong;  Liu, Bin;  Yang, Fan;  Ma, Gaigai;  Li, Guoyong;  Liu, Yanchun;  Liu, Yinzhan;  Yang, Zhongling;  Zhang, Kesheng;  Miao, Yuan;  Hu, Mengjun;  Yan, Chuang;  Zhang, Ang;  Zhong, Mingxing;  Hui, Yan;  Li, Ying;  Zheng, Mengmei
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Polyploidy Index and Its Implications for the Evolution of Polyploids 期刊论文
FRONTIERS IN GENETICS, 2019, 卷号: 10
Authors:  Wang, Jinpeng;  Qin, Jun;  Sun, Pengchuan;  Ma, Xuelian;  Yu, Jigao;  Li, Yuxian;  Sun, Sangrong;  Lei, Tianyu;  Meng, Fanbo;  Wei, Chendan;  Liu, Xinyu;  Guo, He;  Liu, Xiaojian;  Xia, Ruiyan;  Li Wang;  Ge, Weina;  Song, Xiaoming;  Zhang, Lan;  Guo, Di;  Wang, Jinyu;  Baol, Shoutong;  Jiang, Shan;  Feng, Yishan;  Li, Xueping;  Paterson, Andrew H.;  Wang, Xiyin
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polyploidy  angiosperm  P-index  genomics  bioinformatics  
A selfish genetic element confers non-Mendelian inheritance in rice 期刊论文
SCIENCE, 2018, 卷号: 360, 期号: 6393, 页码: 1130-1132
Authors:  Yu, Xiaowen;  Zhao, Zhigang;  Zheng, Xiaoming;  Zhou, Jiawu;  Kong, Weiyi;  Wang, Peiran;  Bai, Wenting;  Zheng, Hai;  Zhang, Huan;  Li, Jing;  Liu, Jiafan;  Wang, Qiming;  Zhang, Long;  Liu, Kai;  Yu, Yang;  Guo, Xiuping;  Wang, Jiulin;  Lin, Qibing;  Wu, Fuqing;  Ren, Yulong;  Zhu, Shanshan;  Zhang, Xin;  Cheng, Zhijun;  Lei, Cailin;  Liu, Shijia;  Liu, Xi;  Tian, Yunlu;  Jiang, Ling;  Ge, Song;  Wu, Chuanyin;  Tao, Dayun;  Wang, Haiyang;  Wan, Jianmin
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COLD1基因赋予水稻耐寒性 期刊论文
科学新闻, 2016, 期号: 01, 页码: 38
Authors:  Yun Ma;  Xiaoyan Dai;  Yunyuan Xu;  Wei Luo;  Xiaoming Zheng;  Dali Zeng;  Yajun Pan;  Xiaoli Lin;  Huanhuan Liu;  Dajian Zhang;  Jun Xiao;  Xiaoyu Guo;  Shujuan Xu;  Yuda Niu;  Jingbo Jin;  Hui Zhang;  Xun Xu;  Legong Li;  Wen Wang;  Qian Qian;  Song Ge;  种康
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COLD1  耐寒性  
Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression 期刊论文
BMC GENOMICS, 2012, 卷号: 13, 期号: -, 页码: 300-314
Authors:  Xin Li;  Jingde Zhu;  Fengyi Hu;  Song Ge;  Mingzhi Ye;  Hui Xiang;  Guojie Zhang;  Xiaoming Zheng;  Hongyu Zhang;  Shilai Zhang;  Qiong Li;  Ruibang Luo;  Chang Yu;  Jian Yu;  Jingfeng Sun;  Xiaoyu Zou e.g.
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Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes 期刊论文
NATURE BIOTECHNOLOGY, 2012, 卷号: 30, 期号: -, 页码: 105–111
Authors:  Xun Xu;  Xin Liu;  Song Ge;  Jeffrey D Jensen;  Fengyi Hu;  Xin Li;  Yang Dong;  Ryan N Gutenkunst;  Lin Fang;  Lei Huang;  Jingxiang Li;  Weiming He;  Guojie Zhang;  Xiaoming Zheng;  Fumin Zhang;  Yingrui Li e.g.
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Multilocus Analysis of Nucleotide Variation of Oryza sativa and Its Wild Relatives: Severe Bottleneck during Domestication of Rice 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2007, 卷号: 24, 期号: 3, 页码: 875-888
Authors:  Qihui Zhu;  Xiaoming Zheng;  Jingchu Luo;  Brandon S. Gaut;  Song Ge
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