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Early Domestication History of Asian Rice Revealed by Mutations and Genome-Wide Analysis of Gene Genealogies 期刊论文
RICE, 2022, 卷号: 15, 期号: 1
作者:  Lu, Yingqing;  Xu, Yunzhang;  Li, Nan
Adobe PDF(1603Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
5 ' Genealogy  Coding genealogy  Early mutations  Positive selection  New alleles  Domestication genes  Domesticated traits  Gene type  Hybrid origin  Asian rice  
Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence 期刊论文
BMC GENOMICS, 2021, 卷号: 22, 期号: 1
作者:  Wei, Chendan;  Wang, Zhenyi;  Wang, Jianyu;  Teng, Jia;  Shen, Shaoqi;  Xiao, Qimeng;  Bao, Shoutong;  Feng, Yishan;  Zhang, Yan;  Li, Yuxian;  Sun, Sangrong;  Yue, Yuanshuai;  Wu, Chunyang;  Wang, Yanli;  Zhou, Tianning;  Xu, Wenbo;  Yu, Jigao;  Wang, Li;  Wang, Jinpeng
Adobe PDF(3371Kb)  |  收藏  |  浏览/下载：88/0  |  提交时间：2023/02/24
Rice  Polyploidization  Whole-genome duplication  Duplicated genes  Ongoing gene conversion  
Identification of long noncoding natural antisense transcripts (lncNATs) correlated with drought stress response in wild rice (Oryza nivara) 期刊论文
BMC GENOMICS, 2021, 卷号: 22, 期号: 1
作者:  Xu, Yong-Chao;  Zhang, Jie;  Zhang, Dong-Yan;  Nan, Ying-Hui;  Ge, Song;  Guo, Ya-Long
Adobe PDF(3950Kb)  |  收藏  |  浏览/下载：84/0  |  提交时间：2023/02/24
Drought stress  Long noncoding RNA  O  nivara  Strand-specific RNA-seq  Wild rice  
Integrated global analysis reveals a vitamin E-vitamin K1 sub-network, downstream of COLD1, underlying rice chilling tolerance divergence 期刊论文
CELL REPORTS, 2021, 卷号: 36, 期号: 3
作者:  Luo, Wei;  Huan, Qing;  Xu, Yunyuan;  Qian, Wenfeng;  Chong, Kang;  Zhang, Jingyu
Adobe PDF(5198Kb)  |  收藏  |  浏览/下载：89/0  |  提交时间：2023/02/24
Divergence in flowering time is a major component contributing to reproductive isolation between two wild rice species (Oryza rufipogon and O. nivara) 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 卷号: 63, 期号: 11, 页码: 1714-1724
作者:  Xu, Xun;  Meng, Qing-Lin;  Geng, Mu-Fan;  Ren, Ning-Ning;  Zhou, Lian;  Du, Yu-Su;  Cai, Zhe;  Wang, Mei-Xia;  Wang, Xin;  Wang, Xiu-Hua;  Han, Jing-Dan;  Jiang, Shuai;  Jing, Chun-Yan;  Liu, Rong;  Zheng, Xiao-Ming;  Yang, Qing-Wen;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(899Kb)  |  收藏  |  浏览/下载：131/0  |  提交时间：2022/03/01
reproductive isolation  flowering time  speciation  adaptation  Oryza species  
A selfish genetic element confers non-Mendelian inheritance in rice 期刊论文
SCIENCE, 2018, 卷号: 360, 期号: 6393, 页码: 1130-1132
作者:  Yu, Xiaowen;  Zhao, Zhigang;  Zheng, Xiaoming;  Zhou, Jiawu;  Kong, Weiyi;  Wang, Peiran;  Bai, Wenting;  Zheng, Hai;  Zhang, Huan;  Li, Jing;  Liu, Jiafan;  Wang, Qiming;  Zhang, Long;  Liu, Kai;  Yu, Yang;  Guo, Xiuping;  Wang, Jiulin;  Lin, Qibing;  Wu, Fuqing;  Ren, Yulong;  Zhu, Shanshan;  Zhang, Xin;  Cheng, Zhijun;  Lei, Cailin;  Liu, Shijia;  Liu, Xi;  Tian, Yunlu;  Jiang, Ling;  Ge, Song;  Wu, Chuanyin;  Tao, Dayun;  Wang, Haiyang;  Wan, Jianmin
Adobe PDF(1074Kb)  |  收藏  |  浏览/下载：101/0  |  提交时间：2022/02/25
Comparative metabolomic analysis reveals a reactive oxygen species-dominated dynamic model underlying chilling environment adaptation and tolerance in rice 期刊论文
NEW PHYTOLOGIST, 2016, 卷号: 211, 期号: 4, 页码: 1295-1310
作者:  Zhang, Jingyu;  Luo, Wei;  Zhao, Yuan;  Xu, Yunyuan;  Song, Shuhui;  Chong, Kang
Adobe PDF(3201Kb)  |  收藏  |  浏览/下载：85/0  |  提交时间：2022/07/08
chilling  environmental adaptation  metabolome  reactive oxygen species (ROS)  rice (Oryza sativa)  
Population genetic structure of Oryza rufipogon and Oryza nivara: implications for the origin of O.nivara 期刊论文
MOLECULAR ECOLOGY, 2015, 卷号: 24, 期号: 20, 页码: 5211-5228
作者:  Liu, Rong;  Zheng, Xiao-Ming;  Zhou, Lian;  Zhou, Hai-Fei;  Ge, Song
Adobe PDF(1859Kb)  |  收藏  |  浏览/下载：77/0  |  提交时间：2022/09/13
ecological speciation  population genetic structure  adaptation  wild rice  
COMPARATIVE PHYLOGEOGRAPHY OF THE WILD-RICE GENUS ZIZANIA (POACEAE) IN EASTERN ASIA AND NORTH AMERICA 期刊论文
AMERICAN JOURNAL OF BOTANY, 2015, 卷号: 102, 期号: 2, 页码: 239-247
作者:  Xu, Xin-Wei;  Wu, Jin-Wei;  Qi, Mei-Xia;  Lu, Qi-Xiang;  Lee, Peter F.;  Lutz, Sue;  Ge, Song;  Wen, Jun
Adobe PDF(1271Kb)  |  收藏  |  浏览/下载：95/0  |  提交时间：2022/09/13
cpDNA  eastern Asia  intercontinental disjunction  microsatellite  North America  phylogeography  Zizania  
Understanding rice domestication and implications for cultivar improvement 期刊论文
CURRENT OPINION IN PLANT BIOLOGY, 2013, 卷号: 16, 期号: 2, 页码: 139-146
作者:  Sang, Tao;  Ge, Song
Adobe PDF(350Kb)  |  收藏  |  浏览/下载：39/0  |  提交时间：2023/04/25