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Conversion between duplicated genes generated by polyploidization contributes to the divergence of poplar and willow 期刊论文
BMC PLANT BIOLOGY, 2022, 卷号: 22, 期号: 1
作者:  Wang, Jianyu;  Zhang, Lan;  Wang, Jiaqi;  Hao, Yanan;  Xiao, Qimeng;  Teng, Jia;  Shen, Shaoqi;  Zhang, Yan;  Feng, Yishan;  Bao, Shoutong;  Li, Yu;  Yan, Zimo;  Wei, Chendan;  Wang, Li;  Wang, Jinpeng
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Poplar  Willow  Polyploidization  Duplicated genes  Gene conversion  
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022 期刊论文
NUCLEIC ACIDS RESEARCH, 2022, 卷号: 50, 期号: D1, 页码: D27-D38
作者:  Xue, Yongbiao;  Bao, Yiming;  Zhang Zhang;  Zhao, Wenming;  Xiao, Jingfa;  He, Shun-min;  Zhang, Guoqing;  Li, Yixue;  Guoping, Zhao;  Chen, Runsheng;  Zeng, Jingyao;  Zhang, Yadong;  Shang, Yun-fei;  Mai, Jialin;  Shi, Shuo;  Lu, Mingming;  Bu, Congfan;  Zhang, Zhewen;  Du, Zhenglin;  Wang, Yinying;  Kang, Hongen;  Xu, Tianyi;  Hao, Lili;  Jia, Peilin;  Jiang, Shuai;  Qian, Qiheng;  Zhu, Tong-tong;  Shang, Yunfei;  Zong, Wenting;  Jin, Tong;  Zhang, Yuansheng;  Zou, Dong;  Zhang, Zhang;  Du, Qiang;  Feng, Changrui;  Ma, Lina;  Zhang, Sisi;  Wang, Anke;  Dong, Lili;  Wang, Yan-qing;  Liu, Wan;  Yan, Xing;  Ling, Yunchao;  Zhao, Guoping;  Zhou, Zhihua;  Kang, Wang;  Zhang, Tao;  Ma, Shuai;  Yan, Haoteng;  Liu, Zunpeng;  Ji, Zejun;  Cai, Yusheng;  Wang, Si;  Song, Moshi;  Ren, Jie;  Zhou, Qi;  Qu, Jing;  Zhang, Weiqi;  Liu, Guanghui;  Chen, Xu;  Chen, Tingting;  Sisi, Zhang;  Sun, Yanling;  Yu, Caixia;  Tang, Bixia;  Zhu, Junwei;  Zhai, Shuang;  Sun, Yubin;  Chen, Qiancheng;  Yang, Xiaoyu;  Zhang, Xin;  Sang, Zhengqi;  Wang, Yonggang;  Zhao, Yilin;  Chen, Huanxin;  Lan, Li;  Wang, Yanqing;  Ma, Yingke;  Jia, Yaokai;  Zheng, Xin-chang;  Chen, Meili;  Dong, Zou;  Zhu, Tongtong;  Ming, Chen;  Niu, Guangyi;  Pan, Rong;  Jing, Wei;  Sang, Jian;  Liu, Chang;  Xiong, Yujia;  Lili, Hao;  Zhang, Mochen;  Wang, Guoliang;  Yi, Lizhi;  Wei, Zhao;  Zong, Wenting;  Wu, Song;  Xiong, Zhuang;  Rujiao, Li;  Zheng, Gong;  Li, Rujiao;  Liu, Lin;  Li, Zhao;  Li, Qianpeng;  Wei, Jing;  Luo, Sicheng;  Wang, Jiajia;  Shi, Yirong;  Zhou, Honghong;  Zhang, Peng;  Song, Tingrui;  Li, Yanyan;  Yang, Fei;  Li, Mengwei;  Li, Zhao-hua;  Kang, Hongen;  Zheng, Xinchang;  Li, Ru-jiao;  Tian, Dongmei;  Liu, Xiaonan;  Li, Cuiping;  Teng, Xufei;  Song, Shuhui;  Zhang, Yang;  Niu, Guangyi;  Zhu, Tongtong;  Zhang, Yuansheng;  Chen, Ruru;  Zhang, Rongqin;  Xu, Feng;  Wang, Yifan;  Ling, Yunchao;  Zhou, Chenfen;  Wang, Haizhou;  Teschendorff, Andrew E.;  He, Yungang;  Zhen, Yang;  Li, Cuiping;  Zhu, Junwei;  Li, Lun;  Li, Na;  Gong, Zheng;  Chen, Meili;  Ying Cui;  Duan, Guangya;  Tong, Jin;  Wu, Gangao;  Huang, Tianhao;  Jin, Enhui;  Zhao, Wei;  Kang, Hailong;  Wang, Zhonghuang;  Zeng, Jingyao;  Chen, Hua;  Li, Mingkun;  Zhao, Wenming;  Ning, Wanshan;  Xue, Yu;  Liu, Yanhu;  Cui, Ying;  Zhou, Qijun;  Liu, Xingyan;  Zhang, Longlong;  Mao, Bingyu;  Zhang, Shihua;  Zhang, Yaping;  Wang, Guodong;  Zhu, Qianghui;  Li, Xin;  Li, Menghua;  Liu, Yuanming;  Luo, Hong;  Wu, Xiaoyuan;  Jing, Haichun;  Pan, Yitong;  Chen, Ming;  Ma, Lina;  Shi, Leisheng;  Li, Mingkun;  Lan, Li;  Bao, Yiming;  Zhao, Wen-ming;  Zuo, Zhixiang;  Ren, Jian;  Zhang, Xinxin;  Xiao, Yun;  Li, Xia;  Liu, Dan;  Zhang, Chi;  Xue, Yu;  Zhao, Zheng;  Jiang, Tao;  Wu, Wanying;  Zhao, Fangqing;  Meng, Xianwen;  Peng, Di;  Luo, Hao;  Gao, Feng;  Lin, Shaofeng;  Liu, Chuijie;  Guo, Anyuan;  Yuan, Hao;  Su, Tianhan;  Zhang, Yong E.;  Zhou, Yincong;  Zhang, Weizhi;  Fu, Shanshan;  Tan, Xiaodan;  Xie, Yubin;  Guo, Guoji;  Wang, Chenwei;  Liao, Xingyu;  Gao, Xin;  Wang, Jianxin;  Xie, Guiyan;  Yuan, Chunhui;  Tian, Feng;  Yang, Dechang;  Tang, Dachao;  Wu, Wenyi;  Gou, Yujie;  Han, Cheng;  Cui, Qinghua;  Li, Xiang Shang;  Li, Chuan-Yun;  Luo, XiaoTong;  Ren, Jia;  Li, Xia
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Genomes of leafy and leafless Platanthera orchids illuminate the evolution of mycoheterotrophy 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 4, 页码: 373+
作者:  Li, Ming-He;  Liu, Ke-Wei;  Li, Zhen;  Lu, Hsiang-Chia;  Ye, Qin-Liang;  Zhang, Diyang;  Wang, Jie-Yu;  Li, Yu-Feng;  Zhong, Zhi-Ming;  Liu, Xuedie;  Yu, Xia;  Liu, Ding-Kun;  Tu, Xiong-De;  Liu, Bin;  Hao, Yang;  Liao, Xing-Yu;  Jiang, Yu-Ting;  Sun, Wei-Hong;  Chen, Jinliao;  Chen, Yan-Qiong;  Ai, Ye;  Zhai, Jun-Wen;  Wu, Sha-Sha;  Zhou, Zhuang;  Hsiao, Yu-Yun;  Wu, Wan-Lin;  Chen, You-Yi;  Lin, Yu-Fu;  Hsu, Jui-Ling;  Li, Chia-Ying;  Wang, Zhi-Wen;  Zhao, Xiang;  Zhong, Wen-Ying;  Ma, Xiao-Kai;  Ma, Liang;  Huang, Jie;  Chen, Gui-Zhen;  Huang, Ming-Zhong;  Huang, Laiqiang;  Peng, Dong-Hui;  Luo, Yi-Bo;  Zou, Shuang-Quan;  Chen, Shi-Pin;  Lan, Siren;  Tsai, Wen-Chieh;  van de Peer, Yves;  Liu, Zhong-Jian
Adobe PDF(8532Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
Illegitimate Recombination between Duplicated Genes Generated from Recursive Polyploidizations Accelerated the Divergence of the Genus Arachis 期刊论文
GENES, 2021, 卷号: 12, 期号: 12
作者:  Shen, Shaoqi;  Li, Yuxian;  Wang, Jianyu;  Wei, Chendan;  Wang, Zhenyi;  Ge, Weina;  Yuan, Min;  Zhang, Lan;  Wang, Li;  Sun, Sangrong;  Teng, Jia;  Xiao, Qimeng;  Bao, Shoutong;  Feng, Yishan;  Zhang, Yan;  Wang, Jiaqi;  Hao, Yanan;  Le, Tianyu;  Wang, Jinpeng
Adobe PDF(22512Kb)  |  收藏  |  浏览/下载：78/0  |  提交时间：2023/02/24
Arachis  polyploidization  duplicated genes  gene conversion  subgenome  
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021 期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: D1, 页码: D18-D28
作者:  Xue, Yongbiao;  Bao, Yiming;  Zhang, Zhang;  Zhao, Wenming;  Xiao, Jingfa;  He, Shunmin;  Zhang, Guoqing;  Li, Yixue;  Zhao, Guoping;  Chen, Runsheng;  Song, Shuhui;  Ma, Lina;  Zou, Dong;  Tian, Dongmei;  Li, Cuiping;  Zhu, Junwei;  Gong, Zheng;  Chen, Meili;  Wang, Anke;  Ma, Yingke;  Li, Mengwei;  Teng, Xufei;  Cui, Ying;  Duan, Guangya;  Zhang, Mochen;  Jin, Tong;  Shi, Chengmin;  Du, Zhenglin;  Zhang, Yadong;  Liu, Chuandong;  Li, Rujiao;  Zeng, Jingyao;  Hao, Lili;  Jiang, Shuai;  Chen, Hua;  Han, Dali;  Yongbiao, Xue;  Zhang, Tao;  Kang, Wang;  Qu, Jing;  Zhang, Weiqi;  Liu, Guang-Hui;  Liu, Lin;  Zhang, Yang;  Niu, Guangyi;  Zhu, Tongtong;  Feng, Changrui;  Liu, Xiaonan;  Zhang, Yuansheng;  Li, Zhao;  Chen, Ruru;  Li, Qianpeng;  Hua, Zhongyi;  Jiang, Chao;  Chen, Ziyuan;  He, Fangshu;  Zhao, Yuyang;  Jin, Yan;  Huang, Luqi;  Yuan, Yuan;  Zhou, Chenfen;  Xu, Qingwei;  He, Sheng;  Ye, Wei;  Cao, Ruifang;  Wang, Pengyu;  Ling, Yunchao;  Yan, Xing;  Wang, Qingzhong;  Du, Qiang;  Zong, Wenting;  Kang, Hongen;  Xiong, Zhuang;  Huan, Wendi;  Zhang, Sirui;  Xia, Qiguang;  Fan, Xiaojuan;  Wang, Zefeng;  Chen, Xu;  Chen, Tingting;  Zhang, Sisi;  Tang, Bixia;  Dong, Lili;  Zhang, Zhewen;  Wang, Zhonghuang;  Kang, Hailong;  Wang, Yanqing;  Wu, Song;  Wang, Honggen;  Chen, Ming;  Liu, Chang;  Xiong, Yujia;  Shao, Xueying;  Li, Yanyan;  Zhou, Honghong;  Chen, Xiaomin;  Zheng, Yu;  Kang, Quan;  Hao, Di;  Zhang, Lili;  Luo, Huaxia;  Hao, Yajing;  Zhang, Peng;  Nie, Zhi;  Yu, Shuhuan;  Yang, Fei;  Sang, Jian;  Li, Zhaohua;  Zhang, Xiangquan;  Zhou, Qing;  Zhai, Shuang;  Zhang, Yaping;  Wang, Guodong;  Zhu, Qianghui;  Li, Xin;  Li, Menghua;  Yan, Jun;  Li, Chen;  Wang, Zhennan;  Wang, Xiangfeng;  Liu, Yuanming;  Luo, Hong;  Wu, Xiaoyuan;  Jing, HaiChun;  Song, Tinrui;  Zhao, Yi;  Mehmood, Furrukh;  Ali, Shahid;  Ali, Amjad;  Saleem, Shoaib;  Hussain, Irfan;  Abbasi, Amir A.;  Zuo, Zhixiang;  Ren, Jian;  Zhang, Xinxin;  Xiao, Yun;  Li, Xia;  Tu, Yiran;  Xue, Yu;  Wu, Wanying;  Ji, Peifeng;  Zhao, Fangqing;  Meng, Xianwen;  Peng, Di;  Luo, Hao;  Gao, Feng;  Ning, Wanshan;  Lin, Shaofeng;  Liu, Teng;  Guo, An-Yuan;  Yuan, Hao;  Zhang, Yong E.;  Tan, Xiaodan;  Zhang, Weizhi;  Xie, Yubin;  Wang, Chenwei;  Liu, Chun-Jie;  Yang, De-Chang;  Tian, Feng;  Gao, Ge;  Tang, Dachao;  Yao, Lan;  Cui, Qinghua;  An, Ni A.;  Li, Chuan-Yun;  Luo, XiaoTong
Adobe PDF(489Kb)  |  收藏  |  浏览/下载：596/0  |  提交时间：2023/02/24
Polyploidy Index and Its Implications for the Evolution of Polyploids 期刊论文
FRONTIERS IN GENETICS, 2019, 卷号: 10
作者:  Wang, Jinpeng;  Qin, Jun;  Sun, Pengchuan;  Ma, Xuelian;  Yu, Jigao;  Li, Yuxian;  Sun, Sangrong;  Lei, Tianyu;  Meng, Fanbo;  Wei, Chendan;  Liu, Xinyu;  Guo, He;  Liu, Xiaojian;  Xia, Ruiyan;  Li Wang;  Ge, Weina;  Song, Xiaoming;  Zhang, Lan;  Guo, Di;  Wang, Jinyu;  Baol, Shoutong;  Jiang, Shan;  Feng, Yishan;  Li, Xueping;  Paterson, Andrew H.;  Wang, Xiyin
Adobe PDF(3371Kb)  |  收藏  |  浏览/下载：102/0  |  提交时间：2022/01/06
polyploidy  angiosperm  P-index  genomics  bioinformatics  
Light-induced Variation in Phenolic Compounds in Cabernet Sauvignon Grapes (Vitis vinifera L.) Involves Extensive Transcriptome Reprogramming of Biosynthetic Enzymes, Transcription Factors, and Phytohormonal Regulators 期刊论文
FRONTIERS IN PLANT SCIENCE, 2017, 卷号: 8
作者:  Sun, Run-Ze;  Cheng, Guo;  Li, Qiang;  He, Yan-Nan;  Wang, Yu;  Lan, Yi-Bin;  Li, Si-Yu;  Zhu, Yan-Rong;  Song, Wen-Feng;  Zhang, Xue;  Cui, Xiao-Di;  Chen, Wu;  Wang, Jun
Adobe PDF(13392Kb)  |  收藏  |  浏览/下载：92/0  |  提交时间：2022/03/28
Vitis vinifera  sunlight exposure  phenolic compounds  transcriptome  transcription factor  phytohormone signaling  
The Amborella Genome and the Evolution of Flowering Plants 期刊论文
SCIENCE, 2013, 卷号: 342, 期号: 6165, 页码: 1467+
作者:  Albert, Victor A.;  Barbazuk, W. Bradley;  dePamphilis, Claude W.;  Der, Joshua P.;  Leebens-Mack, James;  Ma, Hong;  Palmer, Jeffrey D.;  Rounsley, Steve;  Sankoff, David;  Schuster, Stephan C.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Wessler, Susan R.;  Wing, Rod A.;  Albert, Victor A.;  Ammiraju, Jetty S. S.;  Barbazuk, W. Bradley;  Chamala, Srikar;  Chanderbali, Andre S.;  dePamphilis, Claude W.;  Der, Joshua P.;  Determann, Ronald;  Leebens-Mack, James;  Ma, Hong;  Ralph, Paula;  Rounsley, Steve;  Schuster, Stephan C.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Talag, Jason;  Tomsho, Lynn;  Walts, Brandon;  Wanke, Stefan;  Wing, Rod A.;  Albert, Victor A.;  Barbazuk, W. Bradley;  Chamala, Srikar;  Chanderbali, Andre S.;  Chang, Tien-Hao;  Determann, Ronald;  Lan, Tianying;  Soltis, Douglas E.;  Soltis, Pamela S.;  Arikit, Siwaret;  Axtell, Michael J.;  Ayyampalayam, Saravanaraj;  Barbazuk, W. Bradley;  Burnette, James M., III;  Chamala, Srikar;  De Paoli, Emanuele;  dePamphilis, Claude W.;  Der, Joshua P.;  Estill, James C.;  Farrell, Nina P.;  Harkess, Alex;  Jiao, Yuannian;  Leebens-Mack, James;  Liu, Kun;  Mei, Wenbin;  Meyers, Blake C.;  Shahid, Saima;  Wafula, Eric;  Walts, Brandon;  Wessler, Susan R.;  Zhai, Jixian;  Zhang, Xiaoyu;  Albert, Victor A.;  Carretero-Paulet, Lorenzo;  dePamphilis, Claude W.;  Der, Joshua P.;  Jiao, Yuannian;  Leebens-Mack, James;  Lyons, Eric;  Sankoff, David;  Tang, Haibao;  Wafula, Eric;  Zheng, Chunfang;  Albert, Victor A.;  Altman, Naomi S.;  Barbazuk, W. Bradley;  Carretero-Paulet, Lorenzo;  dePamphilis, Claude W.;  Der, Joshua P.;  Estill, James C.;  Jiao, Yuannian;  Leebens-Mack, James;  Liu, Kun;  Mei, Wenbin;  Wafula, Eric;  Altman, Naomi S.;  Arikit, Siwaret;  Axtell, Michael J.;  Chamala, Srikar;  Chanderbali, Andre S.;  Chen, Feng;  Chen, Jian-Qun;  Chiang, Vincent;  De Paoli, Emanuele;  dePamphilis, Claude W.;  Der, Joshua P.;  Determann, Ronald;  Fogliani, Bruno;  Guo, Chunce;  Harholt, Jesper;  Harkess, Alex;  Job, Claudette;  Job, Dominique;  Kim, Sangtae;  Kong, Hongzhi;  Leebens-Mack, James;  Li, Guanglin;  Li, Lin;  Liu, Jie;  Ma, Hong;  Meyers, Blake C.;  Park, Jongsun;  Qi, Xinshuai;  Rajjou, Loic;  Burtet-Sarramegna, Valerie;  Sederoff, Ron;  Shahid, Saima;  Soltis, Douglas E.;  Soltis, Pamela S.;  Sun, Ying-Hsuan;  Ulvskov, Peter;  Villegente, Matthieu;  Xue, Jia-Yu;  Yeh, Ting-Feng;  Yu, Xianxian;  Zhai, Jixian;  Acosta, Juan J.;  Albert, Victor A.;  Barbazuk, W. Bradley;  Bruenn, Riva A.;  Chamala, Srikar;  de Kochko, Alexandre;  dePamphilis, Claude W.;  Der, Joshua P.;  Herrera-Estrella, Luis R.;  Ibarra-Laclette, Enrique;  Kirst, Matias;  Leebens-Mack, James;  Pissis, Solon P.;  Poncet, Valerie;  Schuster, Stephan C.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Tomsho, Lynn
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