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Mutational meltdown or controlled chain reaction: The dynamics of rapid plastome evolution in the hyperdiversity of Poaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023, 卷号: 61, 期号: 2, 页码: 328-344
作者:  Wang, Jie;  Fu, Gao-Fei;  Tembrock, Luke R.;  Liao, Xue-Zhu;  Ge, Song;  Wu, Zhi-Qiang
Adobe PDF(2463Kb)  |  收藏  |  浏览/下载：17/0  |  提交时间：2024/03/07
C-4 photosynthesis  evolutionary rate  inverted repeats  monocots  plastome size  
Rearrangement and domestication as drivers of Rosaceae mitogenome plasticity 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1
作者:  Sun, Manyi;  Zhang, Mingyue;  Chen, Xuening;  Liu, Yueyuan;  Liu, Binbin;  Li, Jiaming;  Wang, Runze;  Zhao, Kejiao;  Wu, Jun
Adobe PDF(3866Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Mitogenome  Rosaceae  Rearrangement rate  Domestication  
Plastid Phylogenomics and Plastomic Diversity of the Extant Lycophytes 期刊论文
GENES, 2022, 卷号: 13, 期号: 7
作者:  Chen, Sisi;  Wang, Ting;  Shu, Jiangping;  Xiang, Qiaoping;  Yang, Tuo;  Zhang, Xianchun;  Yan, Yuehong
Adobe PDF(13190Kb)  |  收藏  |  浏览/下载：9/0  |  提交时间：2024/03/07
lycophytes  plastid genome  comparative genomics  clubmoss  plastomic diversity  
Evolutionary and phylogenetic aspects of the chloroplast genome of Chaenomeles species 期刊论文
SCIENTIFIC REPORTS, 2020, 卷号: 10, 期号: 1
作者:  Sun, Jiahui;  Wang, Yiheng;  Liu, Yanlei;  Xu, Chao;  Yuan, Qingjun;  Guo, Lanping;  Huang, Luqi
Adobe PDF(5382Kb)  |  收藏  |  浏览/下载：97/0  |  提交时间：2022/03/01
A Collinearity-Incorporating Homology Inference Strategy for Connecting Emerging Assemblies in the Triticeae Tribe as a Pilot Practice in the Plant Pangenomic Era 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 12, 页码: 1694-1708
作者:  Chen, Yongming;  Song, Wanjun;  Xie, Xiaoming;  Wang, Zihao;  Guan, Panfeng;  Peng, Huiru;  Jiao, Yuannian;  Ni, Zhongfu;  Sun, Qixin;  Guo, Weilong
Adobe PDF(2673Kb)  |  收藏  |  浏览/下载：104/0  |  提交时间：2022/03/01
homology inference  collinearity  database  pangenome  Triticeae tribe  polyploid  
Structural variation of the complete chloroplast genome and plastid phylogenomics of the genus Asteropyrum (Ranunculaceae) 期刊论文
SCIENTIFIC REPORTS, 2019, 卷号: 9
作者:  He, Jian;  Yao, Min;  Lyu, Ru-Dan;  Lin, Le-Le;  Liu, Hui-Jie;  Pei, Lin-Ying;  Yan, Shuang-Xi;  Xie, Lei;  Cheng, Jin
Adobe PDF(7147Kb)  |  收藏  |  浏览/下载：95/0  |  提交时间：2022/01/06
Evolutionary Comparisons of the Chloroplast Genome in Lauraceae and Insights into Loss Events in the Magnoliids 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2017, 卷号: 9, 期号: 9, 页码: 2354-2364
作者:  Song, Yu;  Yu, Wen-Bin;  Tan, Yunhong;  Liu, Bing;  Yao, Xin;  Jin, Jianjun;  Padmanaba, Michael;  Yang, Jun-Bo;  Corlett, Richard T.
Adobe PDF(7866Kb)  |  收藏  |  浏览/下载：119/0  |  提交时间：2022/03/28
Lauraceae  chloroplast  genome  phylogenetic relationship  loss event  
The impact and origin of copy number variations in the Oryza species 期刊论文
BMC GENOMICS, 2016, 卷号: 17
作者:  Bai, Zetao;  Chen, Jinfeng;  Liao, Yi;  Wang, Meijiao;  Liu, Rong;  Ge, Song;  Wing, Rod A.;  Chen, Mingsheng
Adobe PDF(2514Kb)  |  收藏  |  浏览/下载：94/0  |  提交时间：2022/07/08
Oryza species  Copy number variation (CNV)  NGS-based survey  CNV genes  Mutation mechanisms  
Lineage-Specific Reductions of Plastid Genomes in an Orchid Tribe with Partially and Fully Mycoheterotrophic Species 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2016, 卷号: 8, 期号: 7, 页码: 2164-2175
作者:  Feng, Yan-Lei;  Wicke, Susann;  Li, Jian-Wu;  Han, Yu;  Lin, Choun-Sea;  Li, De-Zhu;  Zhou, Ting-Ting;  Huang, Wei-Chang;  Huang, Lu-Qi;  Jin, Xiao-Hua
Adobe PDF(1253Kb)  |  收藏  |  浏览/下载：82/0  |  提交时间：2022/07/08
heterotrophy  plastid genome reduction  Neottieae  Orchidaceae  relaxed selection  
A host plant genome (Zizania latifolia) after a century-long endophyte infection 期刊论文
PLANT JOURNAL, 2015, 卷号: 83, 期号: 4, 页码: 600-609
作者:  Guo, Longbiao;  Qiu, Jie;  Han, Zujing;  Ye, Zihong;  Chen, Chao;  Liu, Chuanjun;  Xin, Xiufang;  Ye, Chu-Yu;  Wang, Ying-Ying;  Xie, Hongqing;  Wang, Yu;  Bao, Jiandong;  Tang, She;  Xu, Jie;  Gui, Yijie;  Fu, Fei;  Wang, Weidi;  Zhang, Xingchen;  Zhu, Qianhua;  Guang, Xuanmin;  Wang, Chongzhi;  Cui, Haifeng;  Cai, Daguang;  Ge, Song;  Tuskan, Gerald A.;  Yang, Xiaohan;  Qian, Qian;  He, Sheng Yang;  Wang, Jun;  Zhou, Xue-Ping;  Fan, Longjiang
Adobe PDF(1121Kb)  |  收藏  |  浏览/下载：90/0  |  提交时间：2022/09/13
host-microbe interaction  genome  resistance gene analogs  Zizania  Jiaobai